Table 6 Genes underlying common genomic regions identified in marker trait association in diverse panel I
From: Association mapping of drought tolerance and agronomic traits in rice (Oryza sativa L.) landraces
Marker | Chr. | Physical position (Mb) a | Traits associated | Genes within confidence interval a | |
|---|---|---|---|---|---|
GLM | MLM | ||||
RM259 | 1 | 7446642..7446813 | CSI, SF, LD, LR, RWC | LT, CSI, SF, LD, Yield per plant | Phosphatidylinositol 3- and 4-kinase family protein LOC_Os01g13360 |
RM490 | 1 | 6677153..6677249 | CSI, CMS | LT, CSI | peptidase C45 LOC_Os01g12230 Hypothetical protein LOC_Os01g12240 |
RM3825 | 1 | 36471204..36471354 | LT, RWC, CMS, CSI, SF, 1000GW, Yield per plant | Yield per plant | Ras-related protein LOC_Os01g62950 Hypothetical protein LOC_Os01g62960 |
RM5633 | 4 | 13084092..13084302 | PH, DFF | DSI, RYR | Retrotransposon protein LOC_Os04g23030 Expressed protein LOC_Os04g23040 |
RM1130 | 6 | 27284878..27285006 | – | DSI, RYR | DNA binding protein LOC_Os06g45110 |
RM1031 | 6 | 31083106..31089543 | CMS, RWC | SF | Expressed protein LOC_Os06g51330 |
RM1026 | 9 | 22605659..22605822 | PH | LR, LD | CTR1-like protein kinase LOC_Os09g39320 |
RM5961 | 11 | 19926656..19926784 | – | 1000GW | Hypothetical protein LOC_Os11g34070 |