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Table 1 Differentially expressed genes in the plant-circadian during flower bud stage

From: Integrated analysis of mRNA-seq and miRNA-seq reveals the advantage of polyploid Solidago canadensis in sexual reproduction

Gene Identifer Gene Name log2(Fold Change) UP/DOWN
CCA1 CL7858.Contig1_All −5.86 down
CDF1 CL8491.Contig1_All 3.19 up
CDF1 CL7233.Contig2_All 1.82 up
CDF1 CL8396.Contig2_All −1.76 down
CDF1 CL7233.Contig3_All −4.00 down
CHE CL6494.Contig1_All 3.43 up
CHE CL12062.Contig1_All 2.92 up
CHE CL11296.Contig1_All 2.38 up
CHE CL2760.Contig2_All 2.15 up
CHE Unigene11750_All − 2.98 down
CHS CL657.Contig2_All 5.52 up
CHS CL14895.Contig7_All 3.13 up
CHS CL657.Contig6_All −1.39 down
CHS CL657.Contig5_All −3.20 down
CHS CL657.Contig1_All −3.45 down
CHS CL14895.Contig8_All −3.49 down
CHS CL657.Contig3_All −4.55 down
CK2b CL12797.Contig4_All 1.93 up
CK2b CL3344.Contig2_All −3.45 down
CK2α Unigene40721_All 1.20 up
CK2α CL5122.Contig1_All −5.14 down
CK3α CL5122.Contig2_All −1.71 down
CK4α CL5450.Contig1_All 1.13 up
CK5α CL6117.Contig1_All 4.06 up
CK6α CL6117.Contig2_All 1.37 up
CK7α CL8572.Contig1_All 1.66 up
CK8α CL8572.Contig2_All −1.39 down
CO CL9716.Contig2_All 5.29 up
CO CL3756.Contig2_All 2.23 up
CO Unigene56230_All 1.91 up
CO CL15403.Contig1_All 1.90 up
CO CL6412.Contig4_All 1.60 up
CO CL4613.Contig1_All −1.90 down
CO CL6412.Contig3_All −3.46 down
CRY CL4897.Contig3_All −1.80 down
GI CL4000.Contig2_All 4.31 up
GI CL4000.Contig1_All 2.91 up
HY5 Unigene48602_All −1.94 down
HY5 CL16959.Contig2_All −3.53 down
HY5 CL18750.Contig1_All −4.64 down
HY5 CL19480.Contig4_All 1.65 up
HY5 CL19480.Contig7_All −3.95 down
LHY CL270.Contig10_All 1.73 up
LHY CL7858.Contig2_All 1.09 up
LHY Unigene40243_All 1.04 up
LHY CL487.Contig3_All −1.26 down
LHY CL447.Contig5_All −3.06 down
LHY CL7858.Contig1_All −5.86 down
PHYB CL6361.Contig2_All 5.99 up
PHYB CL12517.Contig3_All 5.03 up
PHYB Unigene81014_All 4.04 up
PHYB CL6361.Contig1_All 3.83 up
PHYB CL9505.Contig4_All 2.79 up
PHYB CL7348.Contig4_All −1.71 down
PHYB CL8822.Contig3_All −4.64 down
PIF3 Unigene175_All 4.40 up
PIF3 CL6913.Contig1_All 4.20 up
PIF3 CL7457.Contig2_All 3.97 up
PIF3 CL1280.Contig2_All 2.88 up
PIF3 Unigene95348_All 2.74 up
PIF3 CL4218.Contig1_All 2.43 up
PIF3 CL11226.Contig3_All 2.05 up
PIF3 CL4218.Contig3_All 1.83 up
PIF3 Unigene33236_All −1.04 down
PIF3 CL18653.Contig4_All −2.40 down
PIF3 CL7457.Contig1_All −3.51 down
PIF3 CL17590.Contig4_All −4.22 down
PIF3 Unigene44150_All −4.26 down
PIF3 CL1280.Contig3_All −5.69 down
PRR5 CL6647.Contig2_All 2.51 up
PRR5 Unigene56230_All 1.91 up
PRR7 CL19525.Contig10_All 5.57 up
PRR7 CL19525.Contig13_All 5.04 up
PRR7 CL6647.Contig2_All 2.51 up
PRR7 CL2037.Contig3_All 1.67 up
PRR7 CL12994.Contig10_All −3.03 down
PRR7 CL6647.Contig4_All − 3.33 down
ZTL CL14110.Contig2_All 4.68 up
ZTL CL14110.Contig1_All −2.82 down