Sample |  | Raw reads | Adaptor sequence and length with < 18 nt and > 25 nt | Junk reads | Clean reads |
---|---|---|---|---|---|
HO40 | HO40_1 | 17,087,566 | 1,824,397 | 160,613 | 15,102,556 |
HO40_2 | 15,381,430 | 1,191,349 | 131,834 | 14,058,247 | |
HO54 | HO54_1 | 15,504,184 | 1,464,666 | 147,468 | 13,892,050 |
HO54_2 | 18,792,450 | 2,046,587 | 134,962 | 16,610,901 | |
HO68 | HO68_1 | 12,770,282 | 1,373,111 | 82,560 | 11,314,611 |
HO68_2 | 13,660,269 | 4,816,480 | 30,860 | 8,812,929 | |
HO81 | HO81_1 | 13,489,436 | 2,151,260 | 62,326 | 11,275,850 |
HO81_2 | 10,989,687 | 2,342,466 | 74,391 | 8,572,830 | |
LO40 | LO40_1 | 14,051,494 | 2,970,987 | 122,646 | 10,957,861 |
LO40_2 | 13,797,449 | 4,423,308 | 93,188 | 9,280,953 | |
LO54 | LO54_1 | 14,790,646 | 3,030,592 | 54,704 | 11,705,350 |
LO54_2 | 14,346,000 | 2,721,911 | 108,500 | 11,515,589 | |
LO68 | LO68_1 | 13,911,458 | 1,846,479 | 82,175 | 11,982,804 |
LO68_2 | 16,195,799 | 1,553,201 | 79,763 | 14,562,835 | |
LO81 | LO81_1 | 17,910,804 | 2,992,808 | 74,723 | 14,843,273 |
LO81_2 | 15,646,123 | 5,115,030 | 61,672 | 10,469,421 | |
Total | Â | 238,325,077 | 41,864,632 | 1,502,385 | 194,958,060 |
Average | Â | 14,895,317 | 2,616,540 | 93,899 | 12,184,879 |