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Table 2 Type and number of Simple-Sequence Repeat (SSRs) found in the four Alpinia plastomes

From: Phylogenetic analysis and development of molecular markers for five medicinal Alpinia species based on complete plastome sequences

Type Repeat Unit Numbers of Repeats
A. galanga A. nigra A. officinarum A. oxyphylla
Mono- A/T 172 179 178 177
C/G 7 6 7 7
Di- AT/AT 62 65 64 64
AC/GT 2 1 1 1
AG/CT 21 21 22 0
Tri- AAT/ATT 1 1 0 0
AAG/CTT 3 3 3 3
AG C/CTG 0 0 0 0
AG G/CCT 1 0 1 1
ACT/AGT 1 1 0 0
Tetra- AAAC/GTTT 1 0 1 1
AAAG/CTTT 3 4 1 3
AAAT/ATTT 10 6 9 9
AACT/AGTT 1 1 1 1
AATG/ATTC 1 2 2 1
AATT/AATT 3 1 1 1
ACAT/ATGT 1 1 1 1
Penta- AAAAT/ATTTT 0 0 0 0
AAATC/ATTTG 0 0 0 0
AAATT/AATTT 0 0 1 1
AACCC/GGGTT 0 0 0 0
AATAT/ATATT 3 1 0 0
Hexa- AATATT/AATATT 0 0 0 0
AAATAT/ATATTT 0 0 0 0
AAGAGG/CCTCTT 0 0 0 0
ACTATC/AGTGAT 0 0 0 0
AAATTT/AAATTT 0 0 1 0
AAAATT/AATTTT 0 1 0 0
Total No. -- 293 294 296 293