Table 1 Sequencing the M. denudata transcriptome in nine leaf buds samples from plants that controlled (N11, N12, N13) or cold-treated (CA21, CA22, CA23 and CA31, CA32, CA33)
Sample | Raw_Reads | Raw_Bases | Clean_Reads | Clean_Bases | Valid_Bases | Q30 | GC |
|---|---|---|---|---|---|---|---|
N11 | 49,865,558 | 7.48E+ 09 | 48,407,068 | 7.02E+ 09 | 93.85% | 95.56% | 47.17% |
N12 | 49,758,436 | 7.46E+ 09 | 48,219,698 | 6.96E+ 09 | 93.29% | 95.37% | 47.25% |
N13 | 49,744,998 | 7.46E+ 09 | 48,084,642 | 6.98E+ 09 | 93.52% | 95.19% | 47.17% |
CA21 | 49,232,860 | 7.38E+ 09 | 47,539,238 | 6.86E+ 09 | 92.92% | 94.80% | 47.34% |
CA22 | 49,135,554 | 7.37E+ 09 | 47,379,256 | 6.83E+ 09 | 92.69% | 94.60% | 48.25% |
CA23 | 49,868,708 | 7.48E+ 09 | 48,208,074 | 6.92E+ 09 | 92.49% | 94.36% | 47.73% |
CA31 | 49,536,752 | 7.43E+ 09 | 48,047,294 | 6.92E+ 09 | 93.07% | 95.22% | 48.44% |
CA32 | 49,101,138 | 7.37E+ 09 | 47,295,846 | 6.82E+ 09 | 92.62% | 94.62% | 47.97% |
CA33 | 44,909,042 | 6.74E+ 09 | 43,302,260 | 6.23E+ 09 | 92.55% | 94.88% | 48.01% |