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Fig. 7 | BMC Plant Biology

Fig. 7

From: Genome-wide identification and function analysis of HMAD gene family in cotton (Gossypium spp.)

Fig. 7

Core promoter element. A phylogenetic tree at left from HMAD protein sequences was constructed with MEGA X using neighbor-joining method. The core promoter element at right were generated based on Plant CARE database (http://bioinformatics.psb.ugent.be/webtools/plantcare/html/). AACA_motif: involved in endosperm-specific negative expression. ABRE: cis-acting element involved in the abscisic acid responsiveness. ARE: cis-acting regulatory element essential for the anaerobic induction. AT−rich sequence: element for maximal elicitor-mediated activation (2copies). AuxRE: part of an auxin-responsive element. CAT−box: cis-acting regulatory element related to meristem expression. CCAAT−box: MYBHv1 binding site. CGTCA−motif: cis-acting regulatory element involved in the MeJA-responsiveness. Circadian: cis-acting regulatory element involved in circadian control. DRE: cis-acting element involved in dehydration, low-temp, salt stresses. GARE−motif: gibberellin-responsive element. GC − motif: enhancer-like element involved in anoxic specific inducibility. GCN4 − motif: cis-regulatory element involved in endosperm expression. HD − Zip 1: element involved in differentiation of the palisade mesophyll cells. LTR: cis-acting element involved in low-temperature responsiveness. MBS: MYB binding site involved in drought-inducibility. MBSI: MYB binding site involved in flavonoid biosynthetic genes regulation. MSA − like: cis-acting element involved in cell cycle regulation P − box: gibberellin-responsive element. RY − element: cis-acting regulatory element involved in seed-specific regulation. SARE: cis-acting element involved in salicylic acid responsiveness. TATC−box: cis-acting element involved in gibberellin-responsiveness. TC − rich repeats: cis-acting element involved in defense and stress responsiveness. TCA − element: cis-acting element involved in salicylic acid responsiveness. TGA − box: part of an auxin-responsive element. TGA − element: auxin-responsive element. TGACG−motif: cis-acting regulatory element involved in the MeJA-responsiveness. Unnamed_1: 60 K protein binding site. WUN − motif: wound-responsive element

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