Table 2 Predicted degraded B. napus targets of upregulated B. napus small RNAs based on degradome sequencing data analysed using PARESnip2

BnaA08g20190D

3

1211

3.5

−23.6

−32.9

0.717325

0.019978

M

BnaA02g03600D

0

748

4

−20.6

−28.9

0.712803

0.000756

M, I

BnaC03g43110D

2

219

4

−24.2

−32.3

0.749226

0.039024

M

BnaC05g00280D

2

1144

3

−24.6

−29.6

0.831081

0.016924

M

BnaA10g11740D

3

955

4

−25.8

−35.2

0.732955

0.032497

M

BnaA01g22910D

3

848

4

−28.4

−39.6

0.717172

0.038079

M

BnaCnng67150D

3

68

3

−31

−37.9

0.817942

0.01312

M

BnaA08g28020D

3

917

3.5

−29.1

−40.8

0.713235

0.033058

M

BnaA07g08860D

2

1153

1

−32.6

−39.2

0.831633

0.002904

M

BnaA09g27990D

2

1156

1

−32.6

−39.2

0.831633

0.002897

M,I

BnaC05g21250D

2

1162

1

−32.6

−39.2

0.831633

0.002885

M,I

BnaC07g11360D

2

1141

1

−32.6

−39.2

0.831633

0.002929

M

BnaA03g36860D

3

336

4

−29.6

−41.5

0.713253

0.039506

M

BnaA06g36560D

1

345

2

−33.8

−41.5

0.814458

0.008645

M

BnaC07g17320D

3

1383

2

−33.8

−41.5

0.814458

0.008237

M

BnaA04g18170D

3

388

4

−33.7

−42.3

0.79669

0.025798

M

BnaA10g18410D

3

1347

4

−31.8

−39.7

0.801008

0.021698

M

BnaA02g06410D

2

627

4

−27.5

−39.2

0.701531

0.009812

M

BnaA04g07950D

0

2282

3.5

−31.4

−43.5

0.721839

0.001638

M,I

BnaA07g25390D

0

2174

3.5

−31.4

−43.5

0.721839

0.001718

M,I

BnaA08g17390D

0

2282

4

−30.6

−43.5

0.703448

0.003145

M,I

BnaA09g26170D

0

2333

4

−30.6

−43.5

0.703448

0.003069

M,I

BnaC03g59640D

2

2267

4

−30.6

−43.5

0.703448

0.015732

M

BnaC05g23210D

0

2324

4

−30.6

−43.5

0.703448

0.00308

M,I

BnaC06g27170D

0

2168

3.5

−31.4

−43.5

0.721839

0.001722

M,I

BnaCnng25410D

0

2267

3.5

−31.4

−43.5

0.721839

0.001648

M,I

BnaC01g07210D

3

37

4

−33.7

−43.2

0.780093

0.030433

M

BnaAnng05290D

3

792

4

−26.4

−34.4

0.767442

0.009756

M

BnaA06g11000D

3

299

3

−27.3

−33.2

0.822289

0.042121

M

BnaA06g11010D

3

299

3

−27.3

−33.2

0.822289

0.042404

M

BnaC04g20940D

3

215

0

−33.2

−33.2

1

0.005071

M

BnaC08g38450D

1

1481

3.5

−27.1

−37.5

0.722667

0.001168

M

BnaCnng05480D

2

1980

3.5

−24.2

−34.3

0.705539

0.020979

M

BnaC07g37000D

2

487

0.5

−35.5

−35.9

0.988858

0.003279

M

BnaA09g16090D

3

3478

3.5

−28.4

−35.2

0.806818

0.037582

M

BnaA04g26610D

2

5713

4

−23.8

−33.9

0.702065

0.01421

M

BnaC04g50670D

2

5713

4

−23.8

−33.9

0.702065

0.013297

M

BnaC01g18190D

2

466

3

−22.1

−31

0.712903

0.013158

M

BnaCnng58300D

3

891

4

−26.5

−34.4

0.770349

0.018106

M

BnaA02g03600D

1

748

4

−20.6

−28.9

0.712803

0.003782

I,M

BnaC03g33280D

3

1046

3

−24.3

−28.8

0.84375

0.002259

I

BnaC05g38210D

2

80

4

−25.5

−35.3

0.72238

0.003571

I

BnaA07g18970D

1

840

3.5

−34.6

−46.4

0.74569

0.002773

I

BnaA07g26110D

2

1696

4

−30.9

−39.8

0.776382

0.036546

I

BnaA09g27990D

2

1156

1

−32.6

−39.2

0.831633

0.00145

I,M

BnaC05g21250D

2

1162

1

−32.6

−39.2

0.831633

0.001444

I,M

BnaA07g06060D

0

398

3.5

−31.5

−40.6

0.775862

0.000816

I

BnaA04g07950D

0

2282

3.5

− 31.4

−43.5

0.721839

0.001638

I,M

BnaA07g25390D

0

2174

3.5

−31.4

−43.5

0.721839

0.001718

I,M

BnaA08g17390D

0

2282

4

−30.6

−43.5

0.703448

0.002753

I,M

BnaA09g26170D

0

2333

4

−30.6

−43.5

0.703448

0.002686

I,M

BnaC05g23210D

0

2324

4

−30.6

−43.5

0.703448

0.002695

I,M

BnaC06g27170D

0

2168

3.5

−31.4

−43.5

0.721839

0.001722

I,M

BnaCnng25410D

0

2267

3.5

−31.4

−43.5

0.721839

0.001648

I,M

BnaC03g30850D

3

1850

3.5

−23.1

−29.2

0.791096

0.035487

I

BnaA05g25860D

3

743

4

−20.8

−29.5

0.705085

0.017563

I

BnaA09g37590D

2

3003

4

−24.1

−33

0.730303

0.049431

I

BnaA09g04340D

3

45

4

−25.9

−33.3

0.777778

0.01457

I

BnaA08g00270D

3

152

4

−28

−36

0.777778

0.021834

I

BnaAnng16680D

2

735

3.5

−34.1

−46.4

0.734914

0.016373

I

BnaA06g04910D

3

2188

4

−24

−30.4

0.789474

0.011989

I

BnaA03g18640D

2

3633

2.5

−25.5

−30.4

0.838816

0.001911

I

BnaC08g21330D

3

587

4

−26.8

−37.1

0.722372

0.013281

I

BnaC02g30040D

2

367

2

−27.8

−34.3

0.810496

0.007331

I