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Table 2 Cis-element analysis of MePFK promoters

From: Genome-wide survey of the phosphofructokinase family in cassava and functional characterization in response to oxygen-deficient stress

Motif name Functoin of motif MePFK01 MePFK02 MePFK03 MePFK04 MePFK05 MePFK06 MePFK07 MePFK08 MePFK09 MePFPA1 MePFPA2 MePFPB1 MePFPB2
CACTFTPPCA1 mesophyll DE expression module 1 20 21 17 21 16 2 15 20 26 17 7 25 21
GCN4 MOTIF endosperm-specific expression 1 0 0 0 0 0 0 0 0 0 0 0 0
OSE2ROOTNODULE motifs of organ-specific elements DE (OSE) characteristic of the promoters activated in infected cells DE of root nodules 6 6 8 10 9 5 3 0 5 3 1 10 8
ROOTMOTIFTAPOX1 root-specific expression 25 35 23 33 33 0 74 12 40 48 10 11 8
RY-ELEMENT seed-storage DE protein genes in legume such as soybean 6 2   2     28     3  
POLLEN1LELAT52 pollen specific activation 16 13 24 14 15 3 8 8 19 12 4 6 0
ARR1AT response DE regulator; N = G/A/C/T; AGATT is found in the promoter of rice DE non-symbiotic haemoglobin-2 (NSHB) gene (Ross et al., 2004); 33 20 20 20 24 5 11 7 27 19 5 22 38
GARE GA-responsive element 0 1 0 0 0 2 0 0 3 3 0 0  
ABREZMRAB28/ABRERATERD1 ABA and water-stress responses 3 7 0 1 7 0 1 3 1 2 0 5 4
CATATGGMSAUR Involved in auxin DE responsiveness 2 0 0 2 0 0 0 2 2 0 0 0 4
ARFAT auxin response factor 1 1 1 1 1         
ERE ethylene-induced DE activation of the U3 promoter region 1 1 3 1 2 0 0 0 1 1 1 0  
WRKY710S a transcriptional repressor of the DE gibberellin signaling pathway 5 8 8 12 2 5 3 4 6 8 0 14 6
MYB related responsive to DE water stress in Arabidopsis 9 19 21 7 15 12 10 16 16 11 2 30 16
LTRE1HVBLT49 low-temperature-responsive element 0 3 1 0 0 3 0 8 0 1 0 2 3
ANAERO1CONSENSUS/ANAER03CONSENSUS anaerobic DE genes involved in the fermentative pathway 2 3 3 1 3 1 2 2 3 2 2 1 3
HSE heat shock 0 0 2 0 0 2 0 0 0 0 0 0  
DOFCOREZM binding of Dof proteins 31 22 38 35 26 8 9 31 18 26 5 28 28
  1. Number of every selected cis-element in the MePFKs gene promoters. The yellow part indicated Tissue specific-relative elements; the orange part indicated hormone-relative elements; and the blue part indicated stress-relative elements