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Table 1 Summary of reference transcriptome generated by PacBio Iso-seq

From: Comparative transcriptome analysis reveals regulatory network and regulators associated with proanthocyanidin accumulation in persimmon

 

Reference transcriptome

Statistics of the final reference transcripts

 Total_number

96,463

 N50 length (bp)

5,326

 N90 length (bp)

1,289

 Max_length (bp)

13,843

 Min_length (bp)

290

 Sequence_GC (%)

0.4109

Annotation

 Nr

88,951 (92.21%)

 Nt

78,865 (81.76%)

 Swissprot

69,805 (72.36%)

 KEGG

75,986 (78.77%)

 KOG

75,347 (78.11%)

 Pfam

72,158 (74.8%)

 GO

46,625 (48.33%)

 Intersection

30,264 (31.37%)

 Overall

91,228 (94.57%)