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Table 4 Molecular markers showing association with traits evaluated using a Bayesian multiple-QTL model (vBayesB)

From: Genome-wide association study of individual sugar content in fruit of Japanese pear (Pyrus spp.)

SNP

Trait

LG

Position (cM)

Prob

PVE (%)

Chr07_33139082

SUC

7

33139082

1.00

23.5

Chr09_18310939

SUC

9

18310940

0.93

8.8

Chr12_26930814

SUC

12

26930814

0.99

2.9

Chr04_29871378

FRU

4

29871378

0.97

12.7

Chr06_35256785

FRU

6

35256784

0.87

0.6

Chr10_8714751

FRU

10

8714751

0.97

0.3

Chr10_31918464

FRU

10

31918464

0.87

6.9

Chr11_41197041

FRU

11

41197040

0.99

2.9

Chr14_29691767

FRU

14

29691768

0.99

5.5

Chr01_27419265

GLC

1

27419264

0.91

1.2

Chr07_33139082

GLC

7

33139082

0.89

25.2

Chr10_31918464

GLC

10

31918464

0.87

8.9

Chr11_41197063

GLC

11

41197064

0.96

23.7

Chr14_28907638

SOR

14

28907638

1.00

0.4

Chr15_4672726

SOR

15

4672726

0.88

0.4

Chr02_2240743

TSC

2

2240743

1.00

2.0

Chr05_43292357

TSC

5

43292356

1.00

2.1

Chr07_9849922

TSC

7

9849922

0.98

6.5

Chr04_5362900

HarT

4

5362900

0.93

3.4

Chr05_7790403

HarT

5

7790403

1.00

0.1

Chr05_31445189

HarT

5

31445188

0.98

1.4

Chr06_7938399

HarT

6

7938399

0.97

10.1

Chr07_20343398

HarT

7

20343398

0.99

0.6

Chr13_37081601

HarT

13

37081600

0.97

1.6

Chr17_4322827

HarT

17

4322827

1.00

1.3

Chr01_30025944

FruW

1

30025944

0.89

4.9

Chr07_33920595

FruW

7

33920596

0.95

1.6

Chr09_1463613

FruW

9

1463613

0.89

2.7

Chr16_4765134

FruW

16

4765134

0.88

0.3

Chr02_29263941

FruH

2

29263940

0.91

4.6

Chr08_6783563

FruH

8

6783563

0.88

2.7

Chr12_4383743

FruH

12

4383743

0.87

10.6

Chr02_19653219

SSC

2

19653220

0.91

0.9

Chr04_30194726

SSC

4

30194726

1.00

0.2

Chr17_5809940

SSC

17

5809940

1.00

8.2

Chr01_26225120

Aci

1

26225120

1.00

1.1

Chr04_9535067

Aci

4

9535067

0.92

2.3

Chr06_20720912

Aci

6

20720912

0.91

13.1

Chr06_32310033

Aci

6

32310032

0.95

0.4

Chr09_15996669

Aci

9

15996669

0.90

0.6

  1. Traits are as defined in Table 2 
  2. Prob indicates posterior probability 
  3. PVE indicates the percentage of the phenotypic variance explained by the QTL
  4. SUC = sucrose content, FRU = fructose content, GLC = glucose content, SOR = sorbitol content, TSC = total sugar content, HarT = harvest time, FruW  = fruit weight, FruH = fruit hardness,  SSC = soluble solids concentration (%), Aci = acidity