Skip to main content

Table 3 Significantly enriched GO terms (p < 0.01) found in the set of 533 genes most differentiating gene expression in high nodulating varieties from low nodulating varieties following inoculation with rhizobia based on PLS-DA analysis

From: Chickpea shows genotype-specific nodulation responses across soil nitrogen environment and root disease resistance categories

GO ID

Description

P (Fisher)

Signalling

 GO:0023052

signaling

0.00028

 GO:0007264

small GTPase mediated signal transduction

2.90E-06

 GO:0007154

cell communication

0.00041

 GO:0035556

intracellular signal transduction

0.0004

 GO:0007165

signal transduction

0.00026

 GO:0051716

cellular response to stimulus

0.00164

 GO:0050794

regulation of cellular process

0.00616

 GO:0050789

regulation of biological process

0.00928

Cellular localization

 GO:0051649

establishment of localization in cell

4.60E-05

 GO:0034613

cellular protein localization

7.70E-05

 GO:0006913

nucleocytoplasmic transport

0.00211

 GO:0046907

intracellular transport

4.50E-05

 GO:0070727

cellular macromolecule localization

7.70E-05

 GO:0051169

nuclear transport

0.00211

 GO:0051641

cellular localization

4.90E-05

 GO:0033036

macromolecule localization

0.00087

 GO:0071702

organic substance transport

0.00246

 GO:0006886

intracellular protein transport

7.70E-05

 GO:0015031

protein transport

0.0005

 GO:0008104

protein localization

0.0005

 GO:0045184

establishment of protein localization

0.0005

N compound transport

 GO:0071705

nitrogen compound transport

0.00104

 GO:0015833

peptide transport

0.00031

 GO:0042886

amide transport

0.00031

Cellular Components

 GO:0006996

organelle organization

0.00017

 GO:0044085

cellular component biogenesis

0.00031

 GO:0016043

cellular component organization

0.00061

 GO:0071840

cellular component organization or biogenesis

0.00069

 GO:0022607

cellular component assembly

0.0002

Macromolecule assembly

 GO:0034622

cellular macromolecular complex assembly

2.20E-05

 GO:0065003

macromolecular complex assembly

2.70E-05

 GO:0006325

chromatin organization

0.0007

 GO:0043933

macromolecular complex subunit organization

6.40E-05

 GO:0071103

DNA conformation change

4.50E-05

 GO:0006323

DNA packaging

2.70E-05

 GO:0051276

chromosome organization

0.00025

 GO:0034728

nucleosome organization

0.00028

 GO:0006333

chromatin assembly or disassembly

0.00028

 GO:0006334

nucleosome assembly

0.00028

 GO:0065004

protein-DNA complex assembly

0.00028

 GO:0031497

chromatin assembly

0.00028

 GO:0071824

protein-DNA complex subunit organization

0.00028