Table 1 Comparison of the de novo transcriptome assemblies. BR Hylocereus undatus Bai Rou, FR Hylocereus polyrhizus x undatus Fen Rou, DH Hylocereus polyrhizus Da Hong
Assembly Criteria | BR (white) | FR (pink) | DH (red) | Fan et al., [9] |
|---|---|---|---|---|
Number of contigs | 157,295 | 62,575 | 78,755 | Not reported |
Assembly size [bp] | 182,080,466 | 52,888,161 | 73,229,765 | 49,212,589 |
E90N50 | 1841 | 1527 | 1670 | Not reported |
N50 | 1953 | 1330 | 1498 | 1,647 |
Complete BUSCOs | 85.2 % | 56.4 % | 70.9 % | 70 % |