Genome-wide association study and its applications in the non-model crop Sesamum indicum

BMC Plant Biology

Table 3 Summary of molecular marker based genetic diversity and population structure analysis in sesame

Number of accessions	Source of collection	Marker type	Marker size	Detected alleles	Number of allele per locus	PIC	Genetic diversity	Sub populations identified	References
96	Asia and Africa (22 countries)	SSR	33	137	4.15	0.45	0.508	5	[108]
153	Worldwide (22 countries)	SSR	16	121	7.6	0.42	0.46	3	[109]
404	Chinese core collection	SRAP and SSR	14	126	9	0.39	0.24	2	[107]
453	Chinese core collection	SRAD and SSR	14	126	9	0.3467	0.2218	9	[106]
49	India	SSR	20	NA	3	0.718	NA	2	[110]
277	15 countries	SSR	14	158	11.3	0.568	NA	4	[111]
96	China	SSR and InDels	44	113	2.6	0.31	0.37	2	[104]
545	390 from China, 155 outside China	SSR	42	106	NA	0.41	0.645	3	[112]
216	Chinese core collection	SSR, SRAD and AFLP	79	338	2	0.25	0.2090	2	[113]
216	Chinese core collection	SSR, SRAD and AFLP	79	608	2	0.16	0.13	2	[114]
130	China	SSR and InDels	88	325	3.69	0.36	0.432	2	[115]

ISSN: 1471-2229