Fig. 5

Haplotype analysis of the peak associated with the gene on chromosome 7. (A) Manhattan plots of loci on chromosome 07 associated with BLB incidence. LD heat map (bottom) reflected that associated SNP localized in a haploid between the red dashed lines; (B) Expression of two NBS-LRR genes LOC_Os07g02560 and LOC_Os07g02570 in the NBS-LRR gene cluster in resistant and susceptible rice lines (Transcriptome data); (C) Expression analysis of LOC_Os07g02560 and LOC_Os07g02570 in six resistant and six susceptible varieties at 24 h post inoculation (hpi) of Xoo by qRT–PCR