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Table 4 Significantly altered-transcript abundances of gdh and AMT in the very fine (d < 0.1 mm) and fine (0.1 < d < 2 mm) roots of Gossypium hirsutum in the different treatments

From: Biochar induced improvement in root system architecture enhances nutrient assimilation by cotton plant seedlings

sb

fine root

Down

Gohir.D12G215400

gdh2

-1.69

9.23E-10

  

Gohir.D10G160800

AMT1;1

-2.32

2.40E-13

  

Gohir.D10G160900

AMT1;1

-2.27

9.53E-13

  

Gohir.A10G106700

AMT1;1

-4.10

4.13E-13

Treatment

Organ

Regulation

GG

Description

log 2FC

FDR

soa

very fine root

Up

Gohir.D03G104800

gdh2

1.06

1.76E-09

  

Gohir.A10G106700

AMT1;1

3.91

3.26E-12

  

Gohir.A08G213100

gdh3

3.44

1.13E-10

  

Gohir.D03G104800

gdh2

1.30

4.44E-10

  

Gohir.D08G230200

gdh3

5.00

5.82E-14

sob

  

Gohir.D03G104800

gdh2

1.55

1.28E-08

  

Gohir.D12G198500

gdh2

1.06

1.61E-14

  

Gohir.D08G230200

gdh3

1.78

3.02E-13

  

Gohir.A10G106700

AMT1;1

2.60

9.13E-08

soa

very fine root

Down

Gohir.A12G212900

gdh2

-2.27

9.79E-06

  

Gohir.A10G106400

AMT1;1

-1.18

1.16E-08

sob

  

Gohir.A10G106400

AMT1;1

-1.48

1.24E-12

  

Gohir.A07G072500

AMT1;2

-3.97

4.40E-05

  

Gohir.D07G077000

AMT1;2

-3.70

1.70E-05

sb

fine root

Up

Gohir.A08G213100

gdh3

1.25

6.46E-10

  

Gohir.D08G230200

gdh3

1.90

5.96E-11

  

Gohir.D11G140500

AMT1;1

1.45

7.45E-07

bb

  

Gohir.D10G160900

AMT1;1

2.08

5.55E-10

  

Gohir.A11G134400

AMT1;1

1.73

2.47E-06

boa

  

Gohir.A08G213100

gdh3

2.24

3.24E-09

  

Gohir.D08G230200

gdh3

2.67

1.93E-14

  

Gohir.D10G160900

AMT1;1

2.40

3.63E-11

bb

  

Gohir.D02G050000

AMT1;1

-1.15

3.78E-12

  

Gohir.A10G106400

AMT1;1

-2.87

1.40E-12

  

Gohir.D10G160800

AMT1;1

-1.59

1.34E-13

  

Gohir.A10G106700

AMT1;1

-1.38

2.78E-07

soa

  

Gohir.A10G106400

AMT1;1

-2.14

3.13E-14

sob

  

Gohir.A03G061200

gdh2

-0.80

8.43E-14

  

Gohir.A02G044000

AMT1;1

-1.13

5.48E-15

  

Gohir.A10G106400

AMT1;1

-6.61

5.50E-13

  

Gohir.D10G160800

AMT1;1

-2.63

5.17E-13

  

Gohir.A10G106700

AMT1;1

-4.48

2.77E-14

boa

  

Gohir.D11G140500

AMT1;1

-5.5

1.50E-05

  

Gohir.D10G160800

AMT1;1

-1.86

2.76E-14

  

Gohir.A10G106400

AMT1;1

-3.37

8.51E-13

  

Gohir.A10G106700

AMT1;1

-8.35

6.18E-14

  1. Arabidopsis and pium hirsutum genes identification
  2. log fold change (log 2FC) between five replicated experiments. Transcripts exhibiting a FDR lower than 0.0001%. ck (control), sb (conventional 3.76 g urea kg−1 soil applied in the 0–10 cm soil layer), bb (conventional nitrogen fertilization in the 10–20 cm soil layer), soa (urea was reduced by 25% on the basis of sb plus 37.28 g biochar kg−1 soil), sob (urea was reduced by 50% on the basis of sb plus 37.28 g biochar kg−1 soil), boa (urea was reduced by 25% on the basis of bb plus 37.28 g biochar kg−1 soil), and bob (urea was reduced by 50% on the basis of bb plus 37.28 g biochar kg−1 soil). AMT1;1 (Ammonium transporter1;1), AMT1;2 (Ammonium transporter1;2) and gdh2(glutamate dehydrogenase 2)
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BMC Plant Biology

ISSN: 1471-2229

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