Table 2 Statistical comparison of the obtained reads (after mapping to ribosomes and cassava reference genome)
From: Character changes and Transcriptomic analysis of a cassava sexual Tetraploid
Sample | Total Reads | Unmapped Reads | Unique Mapped Reads | Multiple Mapped Reads | Mapping Ratio | |
|---|---|---|---|---|---|---|
Sexual tetraploid | ST-1 | 45,643,992 | 9,383,481 (20.56%) | 36,039,967 (78.96%) | 220,544 (0.48%) | 79.44% |
ST-2 | 43,351,046 | 8,404,178 (19.39%) | 34,723,052 (80.10%) | 223,816 (0.52%) | 80.61% | |
ST-3 | 45,864,544 | 8,783,710 (19.15%) | 36,845,820 (80.34%) | 235,014 (0.51%) | 80.85% | |
Pollen parent | SC10–1 | 32,017,874 | 6,403,495 (20.00%) | 25,466,457 (79.54%) | 147,922 (0.46%) | 80.00% |
SC10–2 | 39,603,108 | 7,917,056 (19.99%) | 31,476,866 (79.48%) | 209,186 (0.53%) | 80.01% | |
SC10–3 | 34,141,878 | 6,714,779 (19.67%) | 27,256,093 (79.83%) | 171,006 (0.50%) | 80.33% | |
Female parent | SC5–1 | 38,473,060 | 7,372,557 (19.16%) | 30,894,599 (80.30%) | 205,904 (0.54%) | 80.84% |
SC5–2 | 33,531,478 | 6,647,600 (19.82%) | 26,672,456 (79.54%) | 211,422 (0.63%) | 80.18% | |
SC5–3 | 38,578,920 | 7,598,678 (19.70%) | 30,759,608 (79.73%) | 220,634 (0.57%) | 80.30% | |