From: Analysis of miRNA-mediated regulation of flowering induction in Lilium × formolongi
Category | VJ_I | VJ_II | FI_I | FI_II | FD | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Total | unique | Total | unique | Total | unique | Total | unique | Total | unique | ||
Raw reads | 14,240,103 | 4,165,620 | 13,012,678 | 5,070,705 | 25,100,402 | 4,417,437 | 24,430,380 | 5,493,407 | 10,937,263 | 2,363,859 | |
3ADT & length filter | 3,253,881 | 1,696,297 | 1,726,013 | 1,370,377 | 8,960,668 | 1,903,704 | 4,503,056 | 1,379,069 | 5,065,486 | 855,271 | |
Junk reads | 43,445 | 18,415 | 44,301 | 25,086 | 55,442c | 15,965 | 59,104 | 21,952 | 31,103 | 10,933 | |
Rfam | rRNA | 625,844 | 17,010 | 103,024 | 7038 | 830,461 | 18,275 | 152,864 | 8762 | 135,278 | 6417 |
tRNA | 334,519 | 3726 | 271,546 | 3448 | 429,462 | 3870 | 364,860 | 3249 | 74,368 | 1669c | |
snoRNA | 4261 | 380 | 5215 | 436 | 20,391 | 926 | 19,562 | 890 | 17,995 | 843 | |
snRNA | 4524 | 430 | 4826 | 523 | 12,468 | 951 | 8310 | 761 | 5221 | 489 | |
others | 35,921 | 1242 | 8421 | 678 | 97,281 | 1808 | 11,959 | 1010 | 14,357 | 683 | |
Total | 1,005,069 | 22,788 | 393,032 | 12,123 | 1,390,063 | 25,830 | 557,554 | 14,672 | 247,219 | 10,101 | |
Repeats | 8622 | 451 | 8427 | 458 | 19,758 | 680 | 10,301 | 708 | 3934 | 323 | |
valid reads | 9,932,250 | 2,427,801 | 10,843,854 | 3,662,791 | 14,681,011 | 2,471,404 | 19,303,311 | 4,077,107 | 5,590,925 | 1,487,303 |