Table 2 Information and diversity statistics for sequence related amplified polymorphism (SRAP) markers used for association analysis in smooth bromegrass
From: Marker-trait association analysis for drought tolerance in smooth bromegrass
No. | Oligo name | Oligo sequence 5′ → 3′ | NPB/NB | PPB | PIC | MI | RP |
|---|---|---|---|---|---|---|---|
1 | Me1/Em1 | TGAGTCCAAACCGGTTG GACTGCGTACGAATTTGC | 24/33 | 72.73 | 0.47 | 11.28 | 23.94 |
2 | Me1/Em2 | TGAGTCCAAACCGGTTG GACTGCGTACGAATTACG | 26/36 | 72.22 | 0.43 | 11.18 | 24.61 |
3 | Me1/Em3 | TGAGTCCAAACCGGTTG GACTGCGTACGAATTTAG | 23/32 | 71.88 | 0.49 | 11.27 | 20.06 |
4 | Me1/Em4 | TGAGTCCAAACCGGTTG GACTGCGTACGAATTCAG | 19/27 | 70.37 | 0.44 | 8.36 | 19.78 |
5 | Me1/Em5 | TGAGTCCAAACCGGTTG GACTGCGTACGAATTCGA | 24/37 | 64.86 | 0.35 | 8.40 | 25.83 |
6 | Me1/Em6 | TGAGTCCAAACCGGTTG GACTGCGTACGAATTTGA | 25/37 | 67.57 | 0.37 | 9.25 | 26.72 |
7 | Me2/Em1 | TGAGTCCAAACCGGTGT GACTGCGTACGAATTTGC | 20/31 | 64.52 | 0.49 | 9.80 | 23.00 |
8 | Me2/Em2 | TGAGTCCAAACCGGTGT GACTGCGTACGAATTACG | 19/27 | 70.37 | 0.49 | 9.31 | 22.22 |
9 | Me2/Em3 | TGAGTCCAAACCGGTGT GACTGCGTACGAATTTAG | 22/31 | 70.97 | 0.38 | 8.36 | 21.50 |
10 | Me2/Em4 | TGAGTCCAAACCGGTGT GACTGCGTACGAATTCAG | 26/34 | 76.47 | 0.46 | 11.96 | 27.50 |
11 | Me2/Em5 | TGAGTCCAAACCGGTGT GACTGCGTACGAATTCGA | 24/37 | 64.86 | 0.48 | 11.52 | 29.17 |
12 | Me2/Em6 | TGAGTCCAAACCGGTGT GACTGCGTACGAATTTGA | 18/25 | 72.00 | 0.50 | 9.00 | 17.00 |
13 | Me3/Em1 | TGAGTCCAAACCGGATA GACTGCGTACGAATTTGC | 14/19 | 73.68 | 0.46 | 6.44 | 12.50 |
14 | Me3/Em2 | TGAGTCCAAACCGGATA GACTGCGTACGAATTACG | 18/22 | 81.82 | 0.49 | 8.82 | 22.80 |
15 | Me3/Em3 | TGAGTCCAAACCGGATA GACTGCGTACGAATTTAG | 13/16 | 81.25 | 0.45 | 5.85 | 16.70 |
16 | Me3/Em4 | TGAGTCCAAACCGGATA GACTGCGTACGAATTCAG | 23/27 | 85.19 | 0.50 | 11.50 | 26.90 |
17 | Me3/Em5 | TGAGTCCAAACCGGATA GACTGCGTACGAATTCGA | 16/21 | 76.19 | 0.46 | 7.36 | 19.70 |
18 | Me3/Em6 | TGAGTCCAAACCGGATA GACTGCGTACGAATTTGA | 15/19 | 78.95 | 0.41 | 6.15 | 18.60 |
19 | Me4/Em1 | TGAGTCCAAACCGGAGC GACTGCGTACGAATTTGC | 19/30 | 63.33 | 0.44 | 8.36 | 20.00 |
20 | Me4/Em2 | TGAGTCCAAACCGGAGC GACTGCGTACGAATTACG | 28/45 | 62.22 | 0.45 | 12.60 | 31.61 |
21 | Me4/Em3 | TGAGTCCAAACCGGAGC GACTGCGTACGAATTTAG | 16/29 | 55.17 | 0.45 | 7.20 | 18.17 |
22 | Me4/Em4 | TGAGTCCAAACCGGAGC GACTGCGTACGAATTCAG | 23/34 | 67.65 | 0.43 | 9.89 | 26.00 |
23 | Me4/Em5 | TGAGTCCAAACCGGAGC GACTGCGTACGAATTCGA | 20/29 | 68.97 | 0.39 | 7.80 | 20.94 |
24 | Me4/Em6 | TGAGTCCAAACCGGAGC GACTGCGTACGAATTTGA | 23/39 | 58.97 | 0.47 | 10.81 | 28.22 |
25 | Me5/Em1 | TGAGTCCAAACCGGTGC GACTGCGTACGAATTTGC | 25/37 | 67.57 | 0.46 | 11.50 | 26.44 |
26 | Me5/Em2 | TGAGTCCAAACCGGTGC GACTGCGTACGAATTACG | 21/30 | 70.00 | 0.47 | 9.87 | 15.78 |
27 | Me5/Em3 | TGAGTCCAAACCGGTGC GACTGCGTACGAATTTAG | 23/33 | 69.70 | 0.50 | 11.50 | 22.33 |
28 | Me5/Em4 | TGAGTCCAAACCGGTGC GACTGCGTACGAATTCAG | 24/33 | 72.73 | 0.40 | 9.60 | 23.50 |
29 | Me5/Em5 | TGAGTCCAAACCGGTGC GACTGCGTACGAATTCGA | 19/32 | 59.38 | 0.49 | 9.31 | 21.83 |
30 | Me5/Em6 | TGAGTCCAAACCGGTGC GACTGCGTACGAATTTGA | 16/25 | 64.00 | 0.48 | 7.68 | 13.06 |