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Table 2 Tissues expressing subclade IVa bHLHs

From: Insights into the diversification of subclade IVa bHLH transcription factors in Fabaceae

 

Name

Gene ID

Representative tissues expressing the gene

Group1

TSAR3 homologues

GmbHLH100

Glyma13g44570

Flower, pod shell (14–17 DAF)

GmbHLH101

Glyma15g00750

Flower, pod shell (14–17 DAF)

GmbHLH96

Glyma08g23060

Pod shell (7 DAF and 10–13 DAF)

GmbHLH97

Glyma07g03050

Young leaf

LjbHLH086

Lj3g3v0028570

Not available

LotjaGi3g1v0005700

Immmature flower

MtbHLH070

Medtr2g104590

Not available

MtbHLH071/TSAR3

Medtr2g104650

24d seeds

MtbHLH177

Medtr8g069740

Not available

TSAR2 homologues

GmbHLH118

Glyma05g23530

Pod shell

GmbHLH117

Glyma17g16720

Root hair, Root

LjbHLH016

Lj0g3v0151119

Not available

LotjaGi4g1v0240800

Nodules_10dpi, Root hair

MtbHLH093/TSAR2

Medtr4g066460

Not available

Mtr.9397.1.S1_at

Root, Bacterial and Fungal infections

MtbHLH007

Medtr0246s0020

Not available

MtbHLH092

Medtr4g066380

Not available

MtbHLH094

Medtr4g067010

Not available

MtbHLH004

Medtr0011s0210

Not available

MtbHLH005

Medtr0011s0260

Not available

MtbHLH009

Medtr0250s0040

Not available

MtbHLH139

Medtr6g047570

Not available

MtbHLH138

Medtr6g047550

Not available

MtbHLH008

Medtr0246s0050

Not available

MtbHLH113

Medtr4g098035

Not available

TSAR1 homologues

GmbHLH345

Glyma18g48120

Young leaf, Flower, 1 cm Pod, Root

LjbHLH054

Lj1g3v2883900

Nodule

MtbHLH150/TSAR1

Medtr7g080780

Leaf, Root

Group2

GmbHLH114

Glyma13g32650

Nodule, Root, Seeds (10–13 DAF)

GmbHLH115

Glyma15g06680

Nodule

GmbHLH116

Glyma07g30420

Not expressed

GmbHLH334

no correspondence

Not available

LjbHLH032

Lj0g3v0292969

Root, Nodule

LjbHLH152

Lj6g3v2171830

Nodule

MtbHLH043

Medtr2g010450

Nodule (4d), Root

MtbHLH107

Medtr4g092700

Nodule (4d, 14d, 10d)

Group3

GmbHLH110

Glyma17g16740

Pod shells

GmbHLH111

Glyma05g23290

Root

GmbHLH112

Glyma11g04690

Nodule, pod shell (14–17 DAF)

GmbHLH113

Glyma01g40600

Nodule, pod shell (14–17 DAF)

LjbHLH001a

Lj0g3v0034169

Not available

LjbHLH014a

Lj0g3v0140069

Not available

a

LotjaGi4g1v0185900

Root

LjbHLH081

Lj2g3v1984450

Root, Nodule

MtbHLH110

Medtr4g097920

Nodule (4d)

MtbHLH111

Medtr4g097940

Nodule (4d)

MtbHLH123

Medtr5g014640

Nodule (4d)

  1. The expression of representative genes belonging to subclade IVa was determined using publicly available databases and summarised. aLjbHLH001 and LjbHLH014 are found in the L. japonicus Miyakojima MG-20 accession, but both correspond to the same gene in the L. japonicus Gifu B-129 accession