Table 1 DEGs with similarities to genes with functional roles in cell separation events
Contig Name | Eg Locus | TAIR9 accession | Best manual annotation | Gene name | Reference | Separation event |
|---|---|---|---|---|---|---|
CL1Contig6920 | LOC105056882 | AT3G57510 | Endo-polygalacturonase (ADPG1/PGDZAT) | EgPGAZ1 | Arabidopsis anther dehiscence, silique dehiscence, seed abscission | |
CL1Contig9409 | LOC105056874 | AT3G57510 | Endo-polygalacturonase (ADPG1/PGDZAT) | EgPGAZ2 | Arabidopsis anther dehiscence, silique dehiscence, seed abscission | |
CL1Contig10326 | LOC105052147 | AT3G09220 | Laccase 7 | EgLAC7 | [5] | Arabidopsis floral organ abscission |
CL1Contig20303 | LOC105040138 | AT5G66460 | Endo-beta-mannase 7/Glycosyl hydrolase superfamily protein/MANNANASE7 | EgMAN7 | [31] | Arabidopsis silique dehiscence |
CL1Contig16961 | LOC105051708 | AT1G72180 | Receptor-like protein kinase HSL1 | EgHSL1/CEPR2 | [32] | Arabidopsis floral organ abscission |
CL1Contig6450 | LOC105050145 | AT4G36910 | Cystathionine beta-synthase (CBS) family protein | CBSX1/LEJ2 | Arabidopsis anther dehiscence | |
CL1Contig17462 | LOC105059537 | AT5G41410/ Os05g38120 | Homeobox protein BEL1 homolog / SH5 | EgBEL1 | [33] | Rice seed shattering |