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Fig. 1 | BMC Plant Biology

Fig. 1

From: Transcriptome analysis reveals major transcriptional changes during regrowth after mowing of red clover (Trifolium pratense)

Fig. 1

Transcriptome analysis showing biological processes relevant after mowing. a-c DEGs with a |log2foldchange| ≥ 2 are shown in percentage share of each class to the corresponding DEG list in bar charts, dark grey bars show datasets from mown, light grey bars indicate datasets from non-mown plants, showing the changing distribution of DEGs in the various biological processes after mowing. a Classes of DEGs from field A, b Classes of DEGs from field B, c Classes of DEGs from greenhouse grown plants. d-e Venn diagrams showing the number of shared upregulated genes within the mown samples (d) and the number of shared genes within the unmown samples (e) with a |log2foldchange| ≥ 2. Blue circles indicate genes upregulated in the greenhouse, green indicates genes upregulated in field A, and red indicates genes upregulated in field B. f Number of DEGs belonging to the class “phytohormones” within the DEG list of the two field and the greenhouse transcriptomes. The pie chart shows the number of DEGs related to the different phytohormones (abscisic acid, auxin, genes common between the auxin and cytokinin pathway, cytokinin, ethylene, gibberellins, jasmonic acid, and salicylic acid)

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