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Table 1 QTLs for various traits during the seedling stage

From: Linkage analysis, GWAS, transcriptome analysis to identify candidate genes for rice seedlings in response to high temperature stress

Trait

QTL

Chromosome

LOD

Genetic Distance (cM)

Known Gene

CDW

qCDW2.1

2

2.88

98.2–101.3

 
 

qCDW2.2

2

3.65

105.8–107.8

 
 

qCDW2.3

2

3.30

142.5–145.3

 
 

qCDW11

11

4.01

8.1–9.4

 

CFW

qCFW6.1

6

3.09

58.3–60.1

 
 

qCFW6.2

6

2.92

64.2–65.7

 
 

qCFW11

11

3.59

7.8–9.4

 

CSL

qCSL4.1

4

2.57

74.4–78.3

 
 

qCSL4.2

4

3.81

84.2–85.8

 
 

qCSL9

9

5.15

27.3–29.1

 

DW

qDW3

3

3.82

11.0–14.3

GS8 [21]

 

qDW7.1

7

3.68

28.0–29.0

 
 

qDW11

11

6.72

60.5–63.5

 

FW

qFW6

6

2.77

19.1–22.0

abl1 [22]

 

qFW11.1

11

5.01

60.5–64.0

 
 

qFW11.2

11

2.53

66.1–70.4

 

SL

qSL12.1

12

4.80

9.7–11.5

 
 

qSL12.2

12

2.82

21.9–25.9

 

SR

qSR3.1

3

2.96

122.3–125.1

 
 

qSR3.2

9

3.54

2.0–7.5

 
  1. CSL, CFW, and CDW indicate shoot length, fresh weight, and dry weight of the seedlings in control groups, respectively. SL, FW, and DW indicate shoot length, fresh weight, and dry weight of the seedling in treatment groups, respectively. SR indicates the survival rate