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Table 1 Screening of differentially expressed genes through joint analysis of multiple omics, followed by Rfp and orf224 for yeast experiment verification

From: High-generation near-isogenic lines combined with multi-omics to study the mechanism of polima cytoplasmic male sterility

Transcription ID

Protein. accession

Protein interaction

log2FC

p-value

Description

orf224

Rfp

RNA editing protein

 BnaA09g06660D

A0A078FUQ6

+

–

−0.61706

0.00150

RNA recognition motif (RRM)-containing protein

 BnaC06g23390D

A0A078FDM2

–

+

−0.23610

0.53657

RNA polymerase II subunit C-terminal domain phosphatase

 BnaA01g22260D

A0A078GHA1

–

–

− 1.22769

0.01624

RNA-binding protein 25 isoforms X1

Respiratory electron transport chain protein

 BnaA02g35610D

A0A078JFK2

–

+

−0.79086

0.00062

Electron transfer activity/cupredoxin superfamily protein

 BnaA05g32320D

A0A078I0S7

–

+

0.73948

0.16802

NADH dehydrogenase [ubiquinone] iron-sulfur protein 6

 BnaA06g16370D

A0A078F502

–

–

0.98176

−0.00616

Gamma carbonic anhydrase-like 2

 BnaC03g14740D

A0A078I202

+

–

−1.16106

0.00038

SPFH/Band 7/PHB domain-containing membrane protein

 BnaC08g43300D

A0A078GBF1

–

–

−0.87303

0.00190

Encodes UDP-d-apiose synthase

 BnaC09g47460D

A0A078G848

–

+

−1.00000

0.00098

NADH dehydrogenase [ubiquinone] flavoprotein 1

Anther development protein

 BnaA01g13540D

A0A078ICM7

+

–

−1.88014

0.00328

UDP-glucose 4-epimerase 2

 BnaA02g05650D

A0A078F7X9

–

+

0.62574

0.00412

Pollen Ole e 1 allergen and extensin family protein

 BnaA04g21720D

A0A078FVE9

–

–

− 4.52980

0.00001

Type III polyketide synthase A-like

 BnaA08g15000D

A0A078GE34

–

–

−6.67917

0.00010

Tetraketide alpha-pyrone reductase 1-like

 BnaC07g33620D

A0A078F9K9

+

–

0.83443

0.06855

Pollen-specific leucine-rich repeat extension-like protein 1

 BnaA04g26600D

A0A078HGU6

+

–

−1.34373

0.00096

LDL receptor wingless signaling/trafficking chaperone

Energy transport-related protein

 BnaA03g01500D

A0A078FEE1

–

–

−1.18473

0.00094

Lysosomal beta glucosidase-like

 BnaA10g11120D

A0A078HLN1

–

–

−1.42526

0.00070

Calcium-transporting ATPase

 BnaC01g21970D

A0A078H9K8

–

–

−0.64160

0.04709

Dihydrolipoyl dehydrogenase

BnaC06g00540D

A0A078IEJ9

–

–

2.38727

0.00002

Probable mitochondrial chaperone BCS1-B

 BnaCnng66500D

A0A078JT79

–

–

0.88088

0.00126

ATP synthase subunit delta, chloroplastic-like

Tapetum development protein

 BnaA01g23670D

A0A078FYQ2

+

–

−3.60823

0.00012

May play a role in tapetum development.

 BnaA09g10680D

A0A078HQA1

+

–

−5.68514

0.00001

4-Coumarate-CoA ligase-like 1

Oxidative phosphorylation protein

 BnaA01g17520D

A0A078H3Z4

–

+

−2.71786

0.00052

Peroxidase

 BnaC01g19630D

A0A078GUT8

–

–

1.71357

0.00002

NADPH-protochlorophyllide oxidoreductase