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Table 1 Features of the identified T. pseudonana chitinase genes

From: Genome-wide identification of chitinase genes in Thalassiosira pseudonana and analysis of their expression under abiotic stresses

Name

JGI gene ID

Scaffold

Genomic location

Exon

AA

MW(KDa)

pI

TpChi1

21,369

2

chr_2:1,497,142-1,498,555 (+)

2

417

46.40

4.86

TpChi2

21,501

2

chr_2:2,082,322-2,089,884 (−)

16

2070

232.39

5.13

TpChi3

21,626

3

chr_3:306,112–310,877 (−)

4

1464

159.27

4.64

TpChi4

21,917

3

chr_3:1,759,345-1,764,662 (−)

7

1498

165.71

5.21

TpChi5

22,088

4

chr_4:199,894–204,931 (−)

17

1087

118.17

4.51

TpChi6

22,238

4

chr_4:960,301–971,814 (+)

8

3512

373.14

4.09

TpChi7

22,376

4

chr_4:1,635,653-1,638,316 (+)

5

684

74.97

4.66

TpChi8

5406

5

chr_5:1,117,857-1,121,711 (+)

14

901

96.61

4.75

TpChi9

22,909

5

chr_5:2,040,965-2,049,241 (+)

9

2494

273.21

4.44

TpChi10

22,915

5

chr_5:2,100,817-2,105,674 (−)

13

785

87.47

4.61

TpChi11

6636

7

chr_7:81,934–86,292 (+)

5

1349

146.67

4.47

TpChi12

23,384

7

chr_7:448,791–455,002 (−)

8

1819

196.99

4.49

TpChi13

23,470

7

chr_7:953,351–956,745 (+)

3

1031

109.60

4.28

TpChi14

23,629

7

chr_7:1,845,016-1,855,061 (−)

15

2773

304.08

4.31

TpChi15

23,700

8

chr_8:274,001–278,110 (−)

7

1116

119.55

4.44

TpChi16

8279

10

chr_10:177,498–181,104 (+)

10

911

101.63

5.42

TpChi17

24,326

11a

chr_11a:339,905–344,411 (−)

7

1113

118.52

5.08

TpChi18

24,421

12

chr_12:128,580–139,130 (−)

6

3325

359.94

4.25

TpChi19

11,110

19a_19

chr_19a_19:163,538–171,325 (−)

8

2241

241.48

4.37

TpChi20

11,125

19a_19

chr_19a_19:210,121–212,567 (−)

8

656

71.64

4.46

TpChi21

11,236

19a_19

chr_19a_19:528,078–531,770 (+)

4

1122

121.35

4.59

TpChi22

11,237

19a_19

chr_19a_19:532,139–535,390 (+)

8

877

94.94

4.35

TpChi23

11,963

22

chr_22:1,024,768-1,030,124 (−)

13

1438

156.88

4.31

TpChi24

25,849

23

chr_23:244567–250,756 (+)

9

1735

187.00

4.66