Table 2 The top 10 most abundant transcripts in down-regulated and up-regulated genes from RNA-seq data, after comparison mRNA samples D vs. C
Gene name | Locus | log2 FCa | FDR p-valueb |
|---|---|---|---|
Up-regulated DEGs | |||
Anthocyanin 5-aromatic acyltransferase-like | LOC102605147 | 9.45 | 9.20E-14 |
Subtilisin-like protease SBT1.7, transcript variant X2 | LOC102596363 | 9.19 | 9.51E-13 |
Putative uncharacterized protein YER190C-A | LOC107057927 | 8.24 | 5.49E-10 |
Probable disease resistance protein At1g61310, transcript variant X1 | LOC102600040 | 6.68 | 7.34E-06 |
1-Aminocyclopropane-1-carboxylate oxidase 5-like | LOC102589195 | 6.67 | 1.66E-06 |
Trans-resveratrol di-O-methyltransferase-like | LOC107057698 | 6.65 | 1.61E-06 |
Uncharacterized LOC102590955 | LOC102590955 | 6.58 | 1.09E-05 |
Two-component response regulator ARR2 | LOC102596771 | 6.51 | 1.90E-05 |
Uncharacterized LOC107058900 | LOC107058900 | 6.48 | 1.65E-05 |
Miraculin-like | LOC102589829 | 6.27 | 6.09E-05 |
Down-regulated DEGs | |||
Carbonic anhydrase, chloroplastic-like | LOC102589374 | −9.94 | 3.32E-20 |
Miraculin-like | LOC107061746 | −9.28 | 3.78E-13 |
Cannabidiolic acid synthase-like 2 | LOC102604287 | −9.17 | 1.02E-12 |
21 kDa protein-like | LOC102592643 | −9.00 | 2.55E-12 |
Putative UPF0481 protein At3g02645 | LOC102605914 | −9.00 | 3.09E-12 |
Peroxidase 16 | LOC102581043 | −8.40 | 1.77E-10 |
Protein detoxification 29-like | LOC102581213 | −8.39 | 8.42E-42 |
Metallothionein-like protein type 2 | LOC102589950 | −8.32 | 3.98E-10 |
Non-specific lipid-transfer protein 1-like | LOC102599380 | −8.22 | 5.72E-10 |
Threonine dehydratase biosynthetic, chloroplastic-like | LOC102583664 | −8.21 | 5.59E-10 |