BMC Plant Biology

Table 1 The number of differentially expressed genes across the whole genome and on chromosome 3AL between the resistant and susceptible isolines in the two NIL pairs

From: Transcriptomic profiling of wheat near-isogenic lines reveals candidate genes on chromosome 3A for pre-harvest sprouting resistance

Time point	DEG	NIL pairs				Common
		NIL pair 1		NIL pair 2		Common
		Genome	3AL	Genome	3AL	Genome	3AL
15DPA	Up	1204	29	3238	89	681	6
	Down	1174	12	9331	294	514	6
	Total	2378	41	12,569	383	1195	12
25DPA	Up	1188	26	1570	52	304	5
	Down	1202	23	912	26	472	7
	Total	2390	49	2482	78	776	12
35DPA	Up	8342	246	2107	76	715	14
	Down	3654	95	1070	42	583	11
	Total	11,996	341	3177	118	1298	25

DPA Days post anthesis, DEG Differentially expressed genes, Up (upregulated) and Down (downregulated), relative to susceptible isolines, Common DEGs common to both NIL pairs

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ISSN: 1471-2229

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