Table 1 Clusters of sequence identity ≥98% among Agt1 sequences from three Bromeliaceae subfamilies using the DNA sequence clustering software CD-HIT-EST [28]
From: The low-copy nuclear gene Agt1 as a novel DNA barcoding marker for Bromeliaceae
Subfamily | Number of sequences | Number of species | Number of CD-HIT-EST Clusters | Clusters with/without support | Species clusters |
|---|---|---|---|---|---|
Bromelioideae | 288 | 231 | 52 | 31/9 | 12 |
Tillandsioideae | 203 | 155 | 34 | 21/10 | 3 |
Pitcairnioideae | 41 | 39 | 8 | 8/0 | 0 |