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Table 3 Number of correlated transcripts for the collected traits at thresholds Pearson (r = ≤ − 0.5 or ≥ 0.5), Spearman (r = ≤ − 0.5 or ≥ 0.5) and DUO (≥0.65), as well the overlap between the correlation metrics

From: Linking crop traits to transcriptome differences in a progeny population of tetraploid potato

 

Traits

Abbr.

DUO

Pearson

Spearman

Duo∩ Pearson

Duo∩ Spearman

Pearson∩ Spearman

Pearson∩ Spearman∩ Duo

Biotic Stress

Dikeya resistance

DR

33

8

8

1

0

3

0

P. infestans resistance

PIR

52

16

23

1

2

16

1

Tuber blight score

TBS

0

19

23

0

0

4

0

Lesions after Alternaria infection

LAI

0

224

244

0

0

142

0

Alternaria infection volume

AIV

5

18

18

0

0

4

0

HR-like lesion

HRL

4

56

65

0

1

38

0

Tuber

Tuber greening, field

TGF

0

20

2

0

0

1

0

Number of tubers

NoT

0

464

790

0

0

384

0

Yield/plant 2014

YP14

0

9

21

0

0

7

0

Yield/plant 2013

YP13

25

57

11

0

0

4

0

Visible tubers/plant

VT

0

41

7

0

0

0

0

Leaf/shoot/flower

Senescence late season

SLS

75

62

43

6

5

29

4

Growth rate

GR

0

7

10

0

0

6

0

Height

H

5

8

14

0

0

6

0

Necrotic leaves, late-season

NLL

48

39

37

5

6

24

5

Leaf texture

LT

26

11

14

4

4

9

3

Flowering time

FT

0

26

33

0

0

23

0