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Table 1 Summary of rice transcriptome sequencing, assembly and comparison with reference genome

From: Effects of fenclorim on rice physiology, gene transcription and pretilachlor detoxification ability

 Reference transcriptome
Total clean reads284,404,035
Clean bases84.37 Gb
All reads (mapped genes)35,301
Total mapped reads (% of reference genes)71.8–76.3%
Multiple mapped reads (% of reference genes)2.94–4.88%
Uniquely mapped reads (% of reference genes)67.81–72.82%