| Known | bdi-miR156b-5p | 19 | 81 | 4.27E-02 | – | – | | – | – | | – |
| tae-miR159a-p5 | 18 | 38 | 1.75E-02 | – | – | | – | – | | – |
| osa-miR159a.1_L + 1 | – | – | – | – | – | | 41 | 85 | 1.39E-02 | MYB; WD40 repeat-like protein |
| ata-miR164a-5p | – | – | – | – | – | | 19 | 54 | 4.90E-02 | glutathione S-transferase; MAP kinase; |
| ata-miR169d-5p | – | – | – | – | – | | 7 | 23 | 2.13E-02 | protein serine/threonine kinase; ABC transporter C family member 13 |
| ata-miR169d-3p_L-2R + 2 | – | – | – | – | – | | 27 | 92 | 8.22E-05 | galactinol--sucrose galactosyltransferase 2; E3 ubiquitin-protein ligase |
| ata-miR172b-5p | – | – | – | – | – | | 43 | 2 | 1.38E-03 | – |
| sbi-miR399a | 27 | 113 | 5.40E-03 | 9 | 109 | 1.05E-03 | – | – | | Oxidoreductase; transcription factor |
| hvu-miR399 | – | – | – | 24 | 54 | 4.73E-03 | – | – | | UDP-glucosyltransferase; transcription factor |
| ata-miR528-5p | | | – | | | | 3 | 23 | 2.20E-02 | lectin-rich repeat receptor kinase |
| osa-miR530-5p_R + 1_1ss20AG | 5 | 31 | 3.22E-02 | 0 | 11 | 2.57E-03 | – | – | | – |
| osa-miR530-5p_L + 1 | – | – | – | – | – | | 0 | 30 | 4.62E-03 | fructose-bisphosphate aldolase; SCF ubiquitin ligase complex |
| osa-miR827 | – | – | – | 174 | 566 | 2.36E-05 | – | – | | spx-domain-contain; Phenylalanyl-tRNA synthetase |
| tae-miR9653a-3p | – | – | – | – | – | | 181 | 0 | 9.46E-04 | – |
| tae-miR9659-3p | 55 | 0 | 6.03E-03 | _ | _ | | _ | _ | | – |
| tae-miR9661-5p_1ss14GA | – | – | – | _ | _ | | 22 | 0 | 5.49E-03 | – |
| tae-miR9664–3p_L-1 | 15 | 0 | 2.00E-02 | 29 | 62 | 4.34E-03 | 55 | 151 | 2.29E-03 | RPM1; Gibberellin receptor; peptidyl-prolyl cis-trans isomerase; |
| tae-miR9666a-3p | – | – | – | – | – | | 4812 | 911 | 1.38E-07 | Alternative splicing regulator; regulatory protein NPR5-like |
| tae-miR9666b-3p | – | – | – | – | – | | 674 | 318 | 2.57E-04 | stress response |
| tae-miR9672a-3p_L + 2R-2 | – | – | – | 15 | 41 | 4.01E-02 | 19 | 5 | 5.50E-02 | replication factor C subunit 1 |
| tae-miR9774_L + 2 | – | – | – | – | – | | 107 | 42 | 1.12E-03 | – |
| tae-miR9777_L + 2 | – | – | – | – | – | | 14 | 46 | 2.94E-02 | geraniol 8-hydroxylase-like; SCF ubiquitin ligase |
| Novel | PC-3p-40666_99 | 32 | 0 | 1.06E-02 | – | – | | – | – | | transcription factor activity |
| PC-5p-11080_759 | 72 | 21 | 1.73E-02 | – | – | | 0 | 30 | 3.60E-03 | – |
| PC-5p-26413_215 | 23 | 4 | 3.03E-02 | 23 | 9 | 4.43E-02 | 11 | 0 | 5.99E-03 | BRI 1-associated receptor kinase 1-like; LRR receptor-like serine/threonine-protein kinase |
| PC-3p-43479_87 | 24 | 5 | 4.85E-02 | – | – | | – | – | | – |
| tae-miR9655-p5 | 2936 | 668 | 2.87E-04 | – | – | | – | – | | oxidation-reduction process; transcription factor |
| PC-5p-16963_436 | – | | | 32 | 91 | 8.60E-04 | 0 | 74 | 1.78E-02 | – |
| tae-miR1137a-p3_1ss9CT | – | | | 9 | 25 | 1.92E-02 | – | – | | – |
| PC-3p-15988_474 | – | | | – | – | | 206 | 51 | 9.29E-04 | peroxidase activity |
| PC-5p-6533_1330 | – | | | – | – | | 269 | 47 | 3.16E-03 | regulation of transcription |
| PC-3p-33976_137 | – | | | – | – | | 25 | 0 | 3.29E-03 | RPM1 |
| PC-5p-21478_303 | – | | | – | – | | 77 | 21 | 2.41E-02 | lectin S-receptor-like kinase |
| PC-5p-36040_123 | – | | | – | – | | 24 | 9 | 3.25E-02 | protein disulfide isomerase; endopeptidase |
| tae-miR9666a-p5 | – | | | – | – | | 101 | 30 | 3.22E-05 | – |
| tae-miR2916-p3_2ss2TC17CA | – | | | – | – | | 27,736 | 7049 | 1.51E-03 | fructose-bisphosphate aldolase; PRM1; peroxidase |
| tae-miR2916-p5_2ss2AG17TG | – | | | – | – | | 9557 | 2868 | 5.04E-03 | glutathione S-transferase; DELLAL |
| tae-miR2592bj-p3_2ss12TC19AT | – | | | – | – | | 380 | 135 | 1.72E-02 | protein serine/threonine kinase activity; RPM1; |
| PC-3p-21085_312 | – | | | – | – | | 3 | 44 | 1.36E-03 | – |
| PC-3p-21502_303 | – | | | – | – | | 0 | 25 | 1.97E-03 | metalloendopeptidase activity; MYB |
| PC-5p-9458_913 | – | | | – | – | | 0 | 133 | 3.25E-03 | – |
| PC-5p-4529_1828 | – | | | – | – | | 62 | 144 | 1.15E-02 | – |
| PC-3p-11233_746 | – | | | – | – | | 9 | 33 | 2.87E-02 | metalloendopeptidase activitys |
| tae-miR9783-p3_2ss5AG18AC | – | | | – | – | | 4 | 59 | 4.41E-04 | protein RPM1-like |
| tae-miR9657c-p5_1ss20TC | – | | | – | – | | 17 | 114 | 5.39E-04 | Leucine-rich receptor-like protein kinase; |
| tae-miR5384-p5 | – | | | – | – | | 132 | 489 | 5.66E-04 | UDP-glycosyltransferase; transcription factor |
| tae-miR9779-p3 | – | | | – | – | | 11 | 93 | 2.83E-03 | hexose transmembrane transport |
| tae-miR815c-p5_2ss6CT21CT | – | | | – | – | | 21 | 51 | 4.56E-03 | UDP-arabinose 4-epimerase; TGA2-like; Dnaj |
| tae-miR1127b-p5_1ss3TC | – | | | – | – | | 0 | 20 | 6.05E-03 | – |
| tae-miR1122c-p3 | – | | | – | – | | 17 | 46 | 4.34E-02 | phosphatase HAL2; protein kinase |
