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Table 2 Sequencing data of the small RNA libraries constructed from developing wheat grain produced under two nitrogen fertilizer levels

From: Identification of microRNAs in developing wheat grain that are potentially involved in regulating grain characteristics and the response to nitrogen levels

Type

 

LN-7

LN-17

LN-27

HN-7

HN-17

HN-27

No.

%

No.

%

No.

%

No.

%

No.

%

No.

%

Redundant

Raw reads

10,621,127

100

11,752,733

100

10,898,065

100

10,652,837

100

10,948,017

100

10,475,211

100

3 AD and length filter

3,809,346

36.38

6,656,958

56.05

5,115,582

46.94

4,985,140

46.62

6,192,961

56.53

3,646,829

34.73

Other filters

381,771

3.57

898,931

7.72

1,320,520

12.09

332,596

3.13

799,749

7.31

780,664

7.46

Clean reads

6,430,010

60.05

4,196,843

36.23

4,461,963

40.96

5,335,101

50.25

3,955,306

36.16

6,047,718

57.81

Unique

Raw reads

1,698,982

100

1,624,844

100

1,849,117

100

1,561,169

100

1,604,716

100

2,014,214

100

3 AD and length filter

510,620

30.66

715,762

44.70

860,978

46.58

506,277

32.44

656,487

40.75

580,730

28.94

Other filters

16,242

0.95

17,121

1.05

19,361

1.05

14,521

0.93

17,403

1.09

21,412

1.06

Clean reads

1,172,120

68.39

891,960

54.25

968,778

52.37

1,040,371

66.63

930,826

58.16

1,412,072

70.00

  1. No., number of reads; %, percentage of reads. The data are the means of three biological replicates.