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Table 4 Identification of SSRs candidates in DEG genes, indicating position and repeat motif into de transcript. Note the presence of more than one SSRs in some transcripts

From: Molecular bases for drought tolerance in common vetch: designing new molecular breeding tools

ID TranscriptID SSRPositionMotifDescription
Transcript_00199SSR_1396826GTTzinc finger CCCH domain-protein 29/Salt stress
Transcript_01630SSR_943301ATCaspartyl protease family protein
Transcript_02098SSR_1543520ACCAAA-ATPase
Transcript_02315SSR_1808938AACATTUnknown chloroplastic
Transcript_02904SSR_242976AAGGAGUnknown
Transcript_03098SSR_2626360ATGWRKY57
Transcript_03641SSR_3317324ATTCCCU-box domain-containing protein 4-like
Transcript_04246SSR_4169248ATCTTCBIG GRAIN 1-like B
Transcript_05713SSR_5677706CGGGCTUnknown
Transcript_05713SSR_5678822ATGTTGUnknown
Transcript_06440SSR_6348141ACUnknown
Transcript_08212SSR_6623195AAAACUnknown
Transcript_10045SSR_29164CTGRNApol II-adapter
Transcript_10292SSR_81613CTBTB/POZ domain protein Ubiquitination
Transcript_10364SSR_92126AATUnknown
Transcript_10647SSR_141295GTUnknown
Transcript_11503SSR_275755ATCS/T-protein phosphatase 6 regulatory subunit
Transcript_11857SSR_355720ATGBEL1-related homeotic protein
Transcript_12126SSR_408174GTThomeobox-leucine zipper protein ATHB-6-like
Transcript_12316SSR_439106AGTGGTethylene-responsive transcription factor ERF106
Transcript_15579SSR_851407AGGgeranylgeranyl diphosphate reductase
Transcript_17222SSR_10681548CTTUnknown
Transcript_17403SSR_1094574ATCGTChistone H2A.Z-specific chaperone CHZ1-like
Transcript_19735SSR_1368147AACDnaJ-class molecular chaperone withZn finger domain
Transcript_19853SSR_1389230ATCGTP-binding protein OBGC, chloroplastic
Transcript_19875SSR_1393260CTS/T-protein kinase PBL11
Transcript_21213SSR_1592378AATGGTUnknown
Transcript_22868SSR_1784740GGTGTTPP2C
Transcript_23073SSR_1802261ACAT6P-fructokinase
Transcript_24458SSR_1944276ACCUnknown
Transcript_28981SSR_2422798GGGTTTP450-dependent fatty acid hydroxylase
Transcript_29846SSR_2497184CTTTOM1-like (Target Of Myb1 Like 1 Membrane Trafficking Protein)
Transcript_30513SSR_2582379AAGUnknown
Transcript_30774SSR_2613116AAGUnknown
Transcript_31019SSR_2634672CGTDNA topoisomerase
Transcript_34830SSR_3117145ATCPPR|PPR_3
Transcript_34933SSR_3128258AGCAGGNAC53
Transcript_35562SSR_320169AAGATGRNA pol II
Transcript_35581SSR_3202143GTTE3 ubiquitin-protein ligase BOI
Transcript_37552SSR_3464397CTTbHLH13 TF
Transcript_37747SSR_3489237AGGURO-D (Chlorophyll biosynthesis9
Transcript_37747SSR_3490394ATGURO-D (Chlorophyll biosynthesis9
Transcript_40868SSR_3958354ACCSerine/threonine protein kinase
Transcript_43126SSR_42671028AGGfasciclin-like arabinogalactan protein 8-like
Transcript_45977SSR_4565158ATglucan endo-1,3-beta-glucosidase 4
Transcript_46871SSR_4655313AGGTGGMethyltransf_29
Transcript_48008SSR_4739204ATGpyruvate dehydrogenase E2 component
Transcript_53459SSR_5294262GGTTGTstress-associated protein 5 zinc finger A20 and AN1 domain-containing
Transcript_56560SSR_5623430CCTGGGUnknown
Transcript_57761SSR_5745298ACCprotein ALP1-like
Transcript_58453SSR_5821713AGGLRR receptor-like serine/threonine-protein kinase
Transcript_59358SSR_5906671AGtyrosine-protein phosphatase
Transcript_60192SSR_5992115AGTOxidoreductase
Transcript_62649SSR_6230182AGTTGGUnknown