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Table 1 IDA-like gene families in species of the Solanaceae family (genome localization from different Sol Genomics Network databases [30]). All prepropeptides are predicted to be localized in the secretory pathway according to TargetP [31] and SignalP-5.0 [32]

From: Differential expression of IDA (INFLORESCENCE DEFICIENT IN ABSCISSION)-like genes in Nicotiana benthamiana during corolla abscission, stem growth and water stress

Gene

name

Genome

localization

Prepropeptide length (aa)

Predicted signal peptide length (aa)

PIP

domain

NsylIDA1

Nsyl_KD945166.1:74265..74582 forward

105

39

PIPPSAPSKRHN

NsylIDA2

Nsyl_KD978144.1:88678..88980 reverse

100

32

PIPPSAPSKRHN

NsylIDA3

Nsyl_KD951180.1:40337..40579 forward

80

32

PIPPSAPSKRHN

NsylIDA4

Nsyl_KD977536.1:13349..13576 forward

75

22

PIPPSAPSQRHN

NsylIDA5

Nsyl_KD962079.1:38313..38564 forward

83

30

PIPASGPSRKHN

NtomIDA1

Ntom_KB972926.1:26032..26325 forward

97

37

PIPPSAPSKRHN

NtomIDA2

Ntom_KB954314.1:53025..53614 forward

96

32

PIPPSAPSKRHN

NtomIDA3

Ntom_KB969023.1:33965..34204 forward

79

31

PIPPSAPSKRHN

NtomIDA4

Ntom_KB956501.1:19193..19405 reverse

70

22

PIPPSAPSQRHN

NtomIDA5

Ntom_KB958630.1:30910..31161 reverse

83

30

PIPASGPSRKHN

NtabIDA1A

Ntab-BX_AWOK-SS18147:707412..707735 reverse

107

48

PIPPSAPSKRHN

NtabIDA1B

Ntab-BX_AWOK-SS9960:271769..272062 forward

97

37

PIPPSAPSKRHN

NtabIDA2A

Ntab-BX_AWOK-SS12153:24919..25221 reverse

100

32

PIPPSAPSKRHN

NtabIDA2B

Ntab-BX_AWOK-SS20685:67080..68370 reverse

96

32

PIPPSAPSKRHN

NtabIDA3A

Ntab-BX_AWOK-SS473:166199..166441 reverse

80

32

PIPPSAPSKRHN

NtabIDA3B

Ntab-BX_AWOK-SS2799:946688..946927 forward

79

31

PIPPSAPSKRHN

NtabIDA4A

Ntab-BX_AWOK-SS18001:26098..26325 forward

75

22

PIPPSAPSQRHN

NtabIDA4B

Ntab-BX_AWOK-SS12176:491822..492033 reverse

70

22

PIPPSAPSQRHN

NtabIDA5A

Ntab-BX_AWOK-SS18104:315608..315859 reverse

83

30

PIPASGPSRKHN

NtabIDA5B

Ntab-BX_AWOK-SS9524:125323..125574 forward

83

30

PIPASGPSRKHN

NbenIDA1A

Niben101Scf00570:62104..62373 reverse

90

36

PIPPSAPSK-----

NbenIDA1B

Niben101Scf01338:640730..641035 forward

101

35

PIPPSAPSKRHN

NbenIDA2A

Niben101Scf23219:7370..7663 reverse

97

32

PIPPSAPSKRHN

NbenIDA2B

Niben101Scf03368:114599..114892 reverse

97

32

PIPPSAPSKRHN

NbenIDA3A

Niben101Scf18667:206436..206678 forward

80

32

PIPPSAPSKRHN

NbenIDA3B

Niben101Scf01180:267334..267576 reverse

80

32

PIPPSAPSKRHN

NbenIDA4

Niben101Scf19133:87532..87771 forward

79

25

PIPPSAPSQRHN

NbenIDA5A

Niben101Scf03848:699324..699575 forward

83

30

PIPASGPSRKHN

NbenIDA5B

Niben101Scf02135:404883..405122 reverse

79

26

PIPASGPSRKHN

SlycIDA1

SL3.0ch05:4200134..4200439 forward

101

36

PIPPSAPSKRHN

SlycIDA2

SL3.0ch06:38623220..38623453 forward

77

30

PIPPSAPSKRHN

SlycIDA3

SL3.0ch04:5799910..5800149 forward

79

27

PIPPSSPSKRHN

SlycIDA4

SL3.0ch07:58068277..58068558 reverse

93

34

PIPPSAPSKRCN

SlycIDA5

SL3.0ch05:1629558..1629893 forward

111

29

LIPPSGPSRRHN

SlycIDA6

SL3.0ch09:540104..540379 reverse

91

26

PIPPSAPSCRSS

SlycIDA7

SL3.0ch09:546577..546855 reverse

92

27

PLPPSAPSCRSS

SlycIDA8

SL3.0ch11:533813..534061 reverse

82

28

PIPASGPSRKHN

StubIDA1

PGSC0003DMB000000071:252349..252627 reverse

92

27

PIPPSAPSCRSS

StubIDA2

PGSC0003DMB000000131:879373..879621 forward

82

28

PIPASGPSRKHN

StubIDA3

PGSC0003DMB000000243:905236..905523 forward

95

29

PVPPSGPSRRHN

StubIDA4

PGSC0003DMB000000410:16621..16935 reverse

104

36

PIPPSAPSKRHN

StubIDA5

PGSC0003DMB000000420:159814..160050 forward

78

26

PIPPSSPSKRHN

StubIDA6

PGSC0003DMB000000461:377302..377535 forward

77

30

PIPPSAPSKRHN

StubIDA7

PGSC0003DMB000000592:149451..149714 forward

87

34

PIPPSAPSERCN

SmelIDA1

Sme2.5_00993.1:18248..18481 forward

77

30

PIPPSAPSKRHN

SmelIDA2

Sme2.5_04429.1:34294..34539 forward

81

28

PIPPSAPSLRHN

SmelIDA3

Sme2.5_04724.1:40347..40592 forward

81

27

PIPASGPSRKHN

SmelIDA4

Sme2.5_06686.1:19811..20078 forward

85

25

PIPPSAPSDRCN

SmelIDA5

Sme2.5_08129.1:7336..7444 forward

102

34

PIPPSGPSKRHN

SmelIDA6

Sme2.5_09763.1:10983..11228 reverse

81

26

PVPPSAPSDRCN

CaIDA1

PepperUCD10Xch04:178438292..178438525 forward

77

27

PIPPSAPSKRHN

CaIDA2

PepperUCD10Xch06:176812434..176812673 reverse

79

29

PIPPSAPSKRHN

CaIDA3

PepperUCD10Xch11:6480406..6480714 forward

102

33

PIPPSGPSKRHN

CaIDA4

PepperUCD10Xch11:4624209..4624499 forward

96

35

PIPPSAPSKRHN

CaIDA5

PepperUCD10Xch11:6480457..6480714 forward

85

18

PIPPSGPSKRHN

CaIDA6

PepperUCD10Xch11:27920042..27920356 reverse

104

24

PIPPSEPSPRHN