Table 3 Statistics of the RNA-Seq reads for TRV-PSY1&2 and control plants

Raw reads

42,416,708

59,297,192

39,934,284

56,175,286

40,652,118

38,640,458

Clean reads

41,528,460

58,008,450

39,041,364

53,804,542

39,789,524

37,816,924

Total mapped

37,172,244 (94.11%)

34,321,180 (94.01%)

48,743,371 (93.48%)

34,281,536 (94.28%)

36,413,818 (94.43%)

48,753,836 (93.36%)

Mutiple mapped

31,998,762 (81.01%)

29,594,117 (81.06%)

41,808,845 (80.18%)

29,636,940 (81.50%)

31,529,268 (81.76%)

41,082,440 (78.67%)

Uniquely mapped

5,173,482 (13.10%)

4,727,063 (12.95%)

6,934,526 (13.30%)

4,644,596 (12.77%)

4,884,550 (12.67%)

7,671,396 (14.69%)