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Table 3 Size, number, and distribution of tandem repeats in the plastomes of Polypodiaceae

From: Comparative genomic analysis of Polypodiaceae chloroplasts reveals fine structural features and dynamic insertion sequences

Sample Motif Count Start-end Location
N. ovatus 19 4 83,880-83,955 trnT-UGU intron
23 2.3 108,602-108,647 rpl21-rpl32
19 4 149,099-149,174 trnT-UGU intron
N. fortunei 26 2 27,472-27,523 psbM-petN
15 3 52,744-52,788 trnR-UCG-accD
15 3.9 116,723-116,781 ndhA-intron
P. cuspidatus 45 2 1719-1809 matK-rps16
26 2.5 2183-2248 matK-rps16
15 3 113,805-113,849 psaC-ndhE
P. niponica 18 3 25,927-25,980 rpoB-trnD-GUC
15 5 53,389-53,463 trnR-UCG-accD
L. clathratus 24 2 1894-1941 matK-rps16
22 2 21,463-21,506 rpoC1 intron
26 2 93,242-93,293 rrn16-rps12
27 3 93,291-93,380 rrn16-rps12
69 2 93,405-93,542 rrn16-rps12
46 4 93,470-93,653 rrn16-rps12
46 4 144,421-144,604 rps12-rrn16
27 3 144,716-144,796 rps12-rrn16
18 4 144,797-144,848 rps12-rrn16
L. microphyllum 30 1.9 12,813-12,870 atpH-atpI
18 3.1 97,069-97,123 rps7-psbA
47 2.2 98,673-98,773 rps7-psbA
27 1.9 98,749-98,800 rps7-psbA
27 2.9 98,870-98,948 rps7-psbA
15 5 119,960-120,034 ndhA intron
27 2.9 140,326-140,404 psbA- rps7
27 1.9 140,474-140,525 psbA- rps7
47 2.2 140,501-140,601 psbA- rps7
18 3.1 142,151-142,205 psbA- rps7
L. hemionitideus 22 2 19,153-19,197 rpoC2-rpoC1
25 1.9 74,525-74,572 rps11-rpl36
P. bonii 23 2 120,079-120,124 ndhA intron
D. roosii 146 2 5433-5711 trnQ-UGG-psbK
23 2 19,077-19,122 rpoC2-rpoC1
18 3 54,433–54,486 rbcL-trnR-UCG
47 3 54,550-55,871 rbcL-trnR-UCG
42 2 54,644-54,727 rbcL-trnR-UCG
S. yakushimensis 26 2 26,779-26,831 psbM-petN
28 3.2 125,129-125,218 ndhF-ndhD