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Table 2 Comparison of general features of the plastomes of Polypodiaceae

From: Comparative genomic analysis of Polypodiaceae chloroplasts reveals fine structural features and dynamic insertion sequences

Subfamily Microsoroideae Platycerioideae Drynarioideae
Species NO NF PC PN LC LHem LM LHed PBi PBo DR SY
LSC (bp) 81,117 80,670 81,175 81,506 81,093 81,403 81,244 81,395 79,002 82,479 86,040 80,975
SSC (bp) 21,601 21,733 21,688 21,759 21,679 25,492 21,797 21,756 21,485 21,723 24,433 19,848
IR (bp) 24,609 24,756 24,649 24,643 27,113 24,594 27,494 24,593 28,249 26,986 23,416 32,017
Size (bp) 151,936 151,915 152,161 152,551 156,998 156,083 158,029 152,337 156,985 158,174 154,305 164,857
PGGs 88 89 88 88 88 87 88 88 88 88 88 91
tRNAs 35 35 34 35 35 34 35 35 33 35 35 35
rRNA 8 8 8 8 8 8 8 8 8 8 8 8
Pseudo 1 0 1 1 0 2 1 1 1 1 1 1
Genes 132 132 131 132 131 131 132 132 130 132 132 135
LSC (GC%) 40.2 42.1 40.4 41.5 40.46 43.6 40.5 41.9 37.9 40.1 39.8 39.5
SSC (GC%) 37.5 38.8 37.6 39.0 37.9 43.0 37.9 39.7 34.4 37.4 36.6 39.8
IR (GC %) 44.9 45.1 44.8 45.3 45.4 45.9 45.3 45.2 44.9 45.6 45.1 42.7
GC (Total%) 41.3 42.3 41.4 42.4 41.8 44.2 41.8 42.7 39.9 41.6 40.9 40.8
  1. NO N. ovatus, NF N. fortunei, PC P. cuspidatus, PN P. niponica, LC L. clathratus, LHem L. hemionitideus, LM L. microphyllum, LHed L. hederaceum, PBi P. bifurcatum, PBo P. bonii, DR D. roosii, SY S. yakushimensis, PCG protein-coding gene, Pseudo pseudogene