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Table 3 QTL intervals and agronomic traits revealed by QTL mapping in HL-DH and ZX-RIL populations

From: Genome-wide association study of yield and related traits in common wheat under salt-stress conditions

Population

Trait

Chromosome

Position (cM)

Left marker

Right marker

LOD

PVE

Add

LeftCI

RightCI

HL-DH

PH-LS

4D

18.8

AX-89421921

AX-110564616

64.35

25.90

6.87

17.45

20.50

ZX-RIL

SPS-HS

5B

92

AX-109996563

AX-111538681

5.03

5.23

− 0.18

91.50

92.50

ZX-RIL

SL-HS

7A

11

AX-108843150

AX-109347413

3.54

3.56

−0.17

10.50

11.50

  1. Position (cM), distance between QTL and the top marker of each linkage map; LOD, threshold of 2.5 was set for declaring the presence of QTL; PVE (%), phenotypic variation explained by QTL; Add Positive ‘additive effect’ indicated an increasing effect from Hanxuan 10 in the HL-DH population, and Zhongmai 175 in ZX-RIL population; negative ‘additive effect’ indicated an increasing effect from Lumai 14 in HL-DH population, and Xiaoyan 60 in ZX-RIL population
  2. PH plant height, SPS spikelets per spike, SL spike length, HL-DH the DH population of “Hanxuan 10×Lumai 14”, ZX-RIL the RIL population of “Zhongmai 175×Xiaoyan 60”, LS low salinity treatment, HS high salinity treatment