Table 2 Location of S6PP tandem duplication in Poaceae and Ranunculaceae genomes
From: Sucrose-phosphate phosphatase from sugarcane reveals an ancestral tandem duplication
Classification family | Genome | Location | Transcript name (Phytozome13) | Genomic tandem regiona (bp) | |
|---|---|---|---|---|---|
S6PP.1 | S6PP.2 | ||||
Ranunculaceae | Aquilegia coerulea v3.1 | Chr 1 | Aqcoe1G073100.1 | Aqcoe1G073000.1 | 8369 |
Poaceae (Grasses) | Miscanthus sinensis v7.1 | Chr 16 | Misin16G055500.1 | Misin16G055600.1 | 5129 |
Miscanthus sinensis v7.1 | Chr 17 | Misin17G0551400.1 | Misin17G051300.1 | 5283 | |
Panicum hallii v3.0 | Chr 3 | Pahal.3G115900.1 | Pahal.3G116000.1 | 5581 | |
Panicum halli HAL v2.1 | Chr 3 | PhHAL.3G110000.1 | PhHAL.3G110100.1 | 5590 | |
Panicum virgatum v5.1 | Chr 3 N | Pavir.3NG188964.1 | Pavir.3NG189313.1 | 6302 | |
Panicum virgatum v5.1 | Chr 3 K | Pavir.3KG143200.2 | Not annotatedb | 5506 | |
Setaria italica v2.2 | Scaffold_3 | Seita.3G059500.1 | Seita.3G059600.1 | 5694 | |
Setaria viridis v2.1 | Chr 3 | Sevir.3G060400.2 | Not annotatedb | 7793 | |
Sorghum bicolor v3.1.1 | Chr 9 | Sobic.009G040900.2 | Sobic.009G041000.1 | 5198 | |
Sorghum bicolor Rio v2.1 | Chr 9 | SbRio.09G043600.1 | SbRio.09G043700.1 | 5198 | |
Sorghum bicolor_RTx430 v2.1 | Chr 9 | SbiRTx430.09G042400.1 | SbiRTx430.09G042500.1 | 7186 | |