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Fig. 1 | BMC Plant Biology

Fig. 1

From: Genome-wide identification and characterization of small auxin-up RNA (SAUR) gene family in plants: evolution and expression profiles during normal growth and stress response

Fig. 1

Maximum likelihood phylogenetic tree of small auxin-up RNAs (SAURs) in the thirteen plant species. The tree was constructed from multiple sequences alignment of all SAUR proteins from Anthoceros angustus, Marchantia polymorpha, Physcomitrella patens, Selaginella moellendorffii, Ginkgo biloba, Gnetum montanum, Amborella trichopoda, Arabidopsis thaliana, Oryza sativa, Zea mays, Setaria italica, Glycine max and Medicago truncatula using the maximum likelihood method in FastTree v2.1 with the JTT + CAT model. Then SAUR members were clarified in FigTree v1.4.4. There SAUR family had been divided into three subfamily and 10 clades. Bootstrap support rates were labeled at corresponding branches. SAUR subclades reported and members mentioned in the article were also labeled on it. Branches leading to genes from the different phyla were colored according to the simplified phylogeny of land plants that is shown in the top left corner. Different colorful dots were used to represent SAUR members from different species

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BMC Plant Biology

ISSN: 1471-2229

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