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Table 2 Disease resistance transcripts differentially expressed in powdery mildew-resistant (UFGE4033) and susceptible (06–245-03) gerbera breeding lines

From: Sequencing and analysis of gerbera daisy leaf transcriptomes reveal disease resistance and susceptibility genes differentially expressed and associated with powdery mildew resistance

Name

logFC

logCPM

P-Value

FDR

Gh_040832

6.085

2.277

4.60E-07

2.38E-05

Gh_139712

6.078

2.273

1.45E-06

6.54E-05

Gh_033388

5.805

9.673

0.006639

0.048872

Gh_120824

5.535

1.925

0.003898

0.045307

Gh_125359

5.006

1.624

5.22E-04

0.00953

Gh_132880

4.894

1.572

9.77E-04

0.015498

Gh_041003

3.928

5.419

3.18E-04

0.006445

Gh_139698

3.761

3.100

2.86E-08

2.04E-06

Gh_143041

3.725

2.663

6.74E-06

2.51E-04

Gh_102735

3.723

3.366

0.001046

0.016224

Gh_031830

2.477

11.821

2.61E-04

0.004324

Gh_123747

2.135

2.850

8.19E-05

0.002088

Gh_140986

2.133

2.494

8.40E-04

0.014068

Gh_144575

1.756

2.751

0.001036

0.0161

Gh_144173

1.608

3.456

3.63E-04

0.007158

Gh_139696

1.545

3.335

0.00118

0.017864

Gh_136442

1.174

5.241

0.004415

0.049861

Gh_038177

−1.120

3.805

0.003616

0.043319

Gh_142324

−1.513

3.675

0.002462

0.031527

Gh_132788

−1.882

3.058

4.60E-04

0.008694

Gh_137848

−1.948

5.755

1.33E-08

1.03E-06

Gh_140251

−2.045

10.030

1.46E-05

4.92E-04

Gh_142819

−2.079

2.640

3.42E-04

0.006811

Gh_144576

−3.448

6.374

1.95E-05

6.34E-04

Gh_117592

−3.499

3.528

0.003077

0.038091

Gh_144155

−3.837

1.906

0.002783

0.034983

Gh_100122

−4.221

3.130

8.24E-08

5.17E-06

Gh_038083

−4.811

1.434

0.001955

0.026137

Gh_092893

−4.903

2.617

8.35E-07

4.04E-05

Gh_136041

−5.091

1.572

4.89E-04

0.009057

Gh_144610

−5.528

1.815

3.30E-05

9.85E-04

Gh_089443

−5.631

1.873

1.03E-04

0.002544

Gh_127746

−5.781

4.496

3.81E-04

0.007446

Gh_139809

−5.797

1.977

4.31E-05

0.001222

Gh_036154

−6.867

2.749

4.37E-08

2.97E-06

Gh_139561

−6.882

2.763

5.21E-10

5.59E-08

Gh_144617

−7.047

2.899

3.50E-09

3.06E-07

Gh_121691

−7.130

2.954

0.002735

0.034501

Gh_096534

−8.125

5.553

0.002083

0.027624

Gh_144154

−8.248

3.948

4.84E-12

8.29E-10

Gh_142320

−8.994

4.651

5.11E-17

2.35E-14

  1. logFC is the log2 fold change of the expression value
  2. logCPM are the log counts per million reads
  3. FDR false discovery rate. Transcripts were considered differentially expressed based on FDR < 0.05
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BMC Plant Biology

ISSN: 1471-2229

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