From: Candidate genes and SNPs associated with stomatal conductance under drought stress in Vitis
Trait | Year | SNP | Chr | Pos | P value | QTL effect | R2 | Multiple testing corrections |
---|---|---|---|---|---|---|---|---|
Ig T4 | 1 | chr13_11,950,617_C_T | 13 | 11,950,617 | 7.80E-06 | A/D | 0.39 | BC/FDR |
Ig T4 | 1 | chr18_13,519,938_C_T | 18 | 13,519,938 | 8.30E-06 | D | 0.38 | BC/FDR |
Ig T5 | 1 | chr17_10,497,222_C_T | 17 | 10,497,222 | 6.07E-07 | D | 0.25 | BC/FDR |
Ig T9 | 1 | chr3_7,009,222_A_G | 3 | 7,009,222 | 2.34E-07 | A/D | 0.50 | BC/FDR |
Ig T9 | 1 | chr16_21,122,534_A_G | 16 | 21,122,534 | 5.24E-06 | A | 0.56 | BC/FDR |
Ig T3 | 1 | chr6_13,441,720_C_T | 6 | 13,441,720 | 4.82E-05 | A | 0.22 | FDR |
Ig T3 | 1 | chr11_18,012,075_T_C | 11 | 18,012,075 | 3.28E-05 | A | 0.22 | FDR |
Ig T3 | 1 | chr13_10,652,062_A_G | 13 | 10,652,062 | 3.64E-04 | D | 0.17 | FDR |
Ig T3 | 1 | chr13_4,177,522_C_T | 13 | 4,177,522 | 2.29E-05 | A | 0.24 | FDR |
Ig T3 | 1 | chr13_1,833,944_A_G | 13 | 1,833,944 | 1.27E-05 | A | 0.18 | FDR |
Ig T4 | 1 | chr7_17,388,970_A_G | 7 | 17,388,970 | 9.99E-06 | A/D | 0.40 | FDR |
Ig T4 | 1 | chr13_11,952,742_G_T | 13 | 11,952,742 | 1.01E-05 | A/D | 0.40 | FDR |
Ig T4 | 1 | chr5_2,431,422_C_T | 5 | 2,431,422 | 1.24E-05 | A/D | 0.41 | FDR |
Ig T4 | 1 | chr4_18,754,964_C_T | 4 | 18,754,964 | 1.60E-05 | A/D | 0.37 | FDR |
Ig T4 | 1 | chr3_235,211_C_T | 3 | 235,211 | 1.60E-05 | A/D | 0.36 | FDR |
Ig T4 | 1 | chr13_2,031,649_T_C | 13 | 2,031,649 | 1.73E-05 | A/D | 0.36 | FDR |
Ig T9 | 1 | chr10_1,989,600_G_T | 10 | 1,989,600 | 4.71E-05 | A/D | 0.42 | FDR |
Ig T9 | 1 | chr13_2,751,641_A_C | 13 | 2,751,641 | 5.51E-05 | A/D | 0.40 | FDR |
Ig T1 | 2 | chr14_3,096,968_G_T | 14 | 3,096,968 | 9.96E-06 | A | 0.25 | FDR |
Ig T1 | 2 | chr13_4,177,522_C_T | 13 | 4,177,522 | 4.98E-05 | A | 0.22 | FDR |
Ig T9 | 2 | chr7_17,388,970_A_G | 7 | 17,388,970 | 3.78E-05 | A/D | 0.23 | FDR |
Ig T9 | 2 | chr7_20,777,757_C_T | 7 | 20,777,757 | 4.36E-05 | D | 0.27 | FDR |
Ig T9 | 2 | chr9_553,031_C_T | 9 | 553,031 | 2.04E-05 | A/D | 0.27 | FDR |
Ig T9 | 2 | chr13_11,950,617_C_T | 13 | 11,950,617 | 6.57E-05 | A/D | 0.23 | FDR |