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Table 1 Twenty differentially expressed genes with the highest expression changes under salinity in the shoots and roots

From: Comprehensive dissection into morpho-physiologic responses, ionomic homeostasis, and transcriptomic profiling reveals the systematic resistance of allotetraploid rapeseed to salinity

 

Gene ID

Fold change

Regulation

Annotation

Shoots

BnaA02g07120D

26,749

Up

Non-specific lipid-transfer protein 4

 

BnaA02g29990D

14,762

Up

Nitrile-specifier protein 5-like

 

BnaC09g48810D

12,166

Up

Late embryogenesis abundant protein 46

 

BnaA10g20120D

5989

Up

Bidirectional sugar transporter SWEET15-like

 

BnaC02g45160D

4650

Up

Dehydrin Rab18-like

 

BnaA03g13140D

4020

Up

Non-specific lipid-transfer protein 3

 

BnaC01g01500D

3753

Up

Cytochrome P450 81F1-like

 

BnaA10g24180D

3753

Up

Late embryogenesis abundant protein 46

 

BnaC09g43920D

3441

Up

Bidirectional sugar transporter SWEET15-like

 

BnaC03g32950D

3316

Up

Stress-induced protein KIN2

 

BnaA05g30910D

0.0005

Down

Response to water deprivation

 

BnaC04g33320D

0.0015

Down

Pentatricopeptide repeat-containing protein

 

BnaC03g01280D

0.0015

Down

Purine-uracil permease NCS1

 

BnaC01g22240D

0.0017

Down

N-lysine methyltransferase

 

BnaA01g18330D

0.0022

Down

N-lysine methyltransferase

 

BnaA03g38630D

0.0025

Down

Pathogenesis-related protein 1-like

 

BnaA02g15510D

0.0029

Down

Endoglucanase 9-like

 

BnaC02g20750D

0.0031

Down

Endoglucanase 9-like

 

BnaC02g23620D

0.0034

Down

Defensin-like protein 3

 

BnaC08g43380D

0.0039

Down

High-affinity nitrate transporter 2.1

Roots

BnaC03g32950D

3947

Up

Stress-induced protein KIN2

 

BnaA10g24180D

3304

Up

Late embryogenesis abundant protein 46

 

BnaC06g22120D

2469

Up

Defensin-like protein 3

 

BnaCnng27850D

1362

Up

Dehydrin Rab18

 

BnaA09g05190D

1283

Up

Bidirectional sugar transporter SWEET12

 

BnaC05g41300D

1115

Up

Universal stress protein PHOS34-like

 

BnaCnng67820D

1036

Up

Sulfate transporter 3.1

 

BnaC09g48810D

939

Up

Late embryogenesis abundant protein 46

 

BnaC06g21150D

937

Up

Alcohol dehydrogenase class-P

 

BnaA09g49440D

864

Up

Protein phosphatase 2C

 

BnaA02g20580D

0.0004

Down

GDSL esterase/lipase

 

BnaC09g42600D

0.0005

Down

Senescence-associated carboxylesterase 101

 

BnaA05g34160D

0.0005

Down

UDP-glycosyltransferase 83A1

 

BnaA09g51570D

0.0007

Down

Cytochrome P450 78A6

 

BnaC04g19370D

0.0007

Down

S-type anion channel SLAH1

 

BnaC07g34090D

0.0007

Down

Protease

 

BnaA04g03090D

0.0007

Down

Glucan endo-1,3-beta-glucosidase

 

BnaC01g02200D

0.0007

Down

Protein RADIALIS-like 3

 

BnaA03g35580D

0.0007

Down

Cytochrome P450 705A22-like

 

BnaC03g29930D

0.0008

Down

Cysteine-rich receptor-like protein kinase 37

  1. Note: down downregulation; up upregulation