Table 1 Summary of RNA-seq data
Reads | Sample | |||||
|---|---|---|---|---|---|---|
Mock-1 | Mock-2 | Mock-3 | PMMoV-1 | PMMoV-2 | PMMoV-3 | |
Clean Reads | 93,118,712 | 95,261,864 | 87,522,578 | 89,803,414 | 92,455,590 | 86,583,222 |
Mapped Reads | 77,549,891 | 79,662,354 | 73,466,998 | 75,027,543 | 76,114,634 | 71,325,528 |
83.28% | 83.62% | 83.94% | 83.55% | 82.33% | 82.38% | |
Unique Mapped Reads | 71,992,503 | 74,000,161 | 67,056,890 | 69,971,154 | 69,015,728 | 66,366,868 |
77.31% | 77.68% | 76.62% | 77.92% | 74.65% | 76.65% | |
Multiple Map Reads | 5,557,388 | 5,662,193 | 6,410,108 | 5,056,389 | 7,098,906 | 4,958,660 |
5.97% | 5.94% | 7.32% | 5.63% | 7.68% | 5.73% | |
GC Contents | 43.85% | 43.59% | 43.90% | 43.57% | 44.07% | 43.67% |
Q30 | 95.08% | 94.93% | 94.84% | 94.75% | 94.60% | 94.20% |