TY - JOUR AU - Sablowski, R. PY - 2015 DA - 2015// TI - Control of patterning, growth, and differentiation by floral organ identity genes JO - J Exp Bot VL - 66 UR - https://doi.org/10.1093/jxb/eru514 DO - 10.1093/jxb/eru514 ID - Sablowski2015 ER - TY - JOUR AU - Hepworth, J. AU - Lenhard, M. PY - 2014 DA - 2014// TI - Regulation of plant lateral-organ growth by modulating cell number and size JO - Curr Opin Plant Biol VL - 17 UR - https://doi.org/10.1016/j.pbi.2013.11.005 DO - 10.1016/j.pbi.2013.11.005 ID - Hepworth2014 ER - TY - JOUR AU - Koornneef, M. AU - Alonso-Blanco, C. AU - Vreugdenhil, D. PY - 2004 DA - 2004// TI - Naturally occurring genetic variation in Arabidopsis thaliana JO - Annu Rev Plant Biol VL - 55 UR - https://doi.org/10.1146/annurev.arplant.55.031903.141605 DO - 10.1146/annurev.arplant.55.031903.141605 ID - Koornneef2004 ER - TY - JOUR AU - Alonso-Blanco, C. AU - Aarts, M. G. M. AU - Bentsink, L. AU - Keurentjes, J. J. B. AU - Reymond, M. AU - Vreugdenhil, D. PY - 2009 DA - 2009// TI - What has natural variation taught us about plant development, physiology, and adaptation? JO - Plant Cell VL - 21 UR - https://doi.org/10.1105/tpc.109.068114 DO - 10.1105/tpc.109.068114 ID - Alonso-Blanco2009 ER - TY - JOUR AU - Weigel, D. PY - 2012 DA - 2012// TI - Natural variation in Arabidopsis: from molecular genetics to ecological genomics JO - Plant Physiol VL - 158 UR - https://doi.org/10.1104/pp.111.189845 DO - 10.1104/pp.111.189845 ID - Weigel2012 ER - TY - JOUR AU - Brock, M. T. AU - Weinig, C. PY - 2007 DA - 2007// TI - Plasticity and environment-specific covariances: An investigation of floral--vegetative and within flower correlations JO - Evolution. VL - 61 UR - https://doi.org/10.1111/j.1558-5646.2007.00240.x DO - 10.1111/j.1558-5646.2007.00240.x ID - Brock2007 ER - TY - JOUR AU - Juenger, T. AU - Pérez-Pérez, J. M. AU - Bernal, S. AU - Micol, J. L. PY - 2005 DA - 2005// TI - Quantitative trait loci mapping of floral and leaf morphology traits in Arabidopsis thaliana: evidence for modular genetic architecture JO - Evol Dev VL - 7 UR - https://doi.org/10.1111/j.1525-142X.2005.05028.x DO - 10.1111/j.1525-142X.2005.05028.x ID - Juenger2005 ER - TY - JOUR AU - Juenger, T. AU - Purugganan, M. AU - Mackay, T. F. PY - 2000 DA - 2000// TI - Quantitative trait loci for floral morphology in Arabidopsis thaliana JO - Genetics. VL - 156 ID - Juenger2000 ER - TY - JOUR AU - Abraham, M. C. AU - Metheetrairut, C. AU - Irish, V. F. PY - 2013 DA - 2013// TI - Natural variation identifies multiple loci controlling petal shape and size in Arabidopsis thaliana JO - PLoS One VL - 8 UR - https://doi.org/10.1371/journal.pone.0056743 DO - 10.1371/journal.pone.0056743 ID - Abraham2013 ER - TY - JOUR AU - Brock, M. T. AU - Kover, P. X. AU - Weinig, C. PY - 2012 DA - 2012// TI - Natural variation in GA1 associates with floral morphology in Arabidopsis thaliana JO - New Phytol VL - 195 UR - https://doi.org/10.1111/j.1469-8137.2012.04145.x DO - 10.1111/j.1469-8137.2012.04145.x ID - Brock2012 ER - TY - JOUR AU - Mouchel, C. F. AU - Briggs, G. C. AU - Hardtke, C. S. PY - 2004 DA - 2004// TI - Natural genetic variation in Arabidopsis identifies BREVIS RADIX, a novel regulator of cell proliferation and elongation in the root JO - Genes Dev VL - 18 UR - https://doi.org/10.1101/gad.1187704 DO - 10.1101/gad.1187704 ID - Mouchel2004 ER - TY - JOUR AU - Nordborg, M. AU - Weigel, D. PY - 2008 DA - 2008// TI - Next-generation genetics in plants JO - Nature. VL - 456 UR - https://doi.org/10.1038/nature07629 DO - 10.1038/nature07629 ID - Nordborg2008 ER - TY - STD TI - 1001 Genomes Consortium. Electronic address: magnus.nordborg@gmi.oeaw.ac.at, 1001 Genomes Consortium. 1,135 Genomes Reveal the Global Pattern of Polymorphism in Arabidopsis thaliana. Cell. 2016;166:481–91. ID - ref13 ER - TY - JOUR AU - Long, Q. AU - Rabanal, F. A. AU - Meng, D. AU - Huber, C. D. AU - Farlow, A. AU - Platzer, A. PY - 2013 DA - 2013// TI - Massive genomic variation and strong selection in Arabidopsis thaliana lines from Sweden JO - Nat Genet VL - 45 UR - https://doi.org/10.1038/ng.2678 DO - 10.1038/ng.2678 ID - Long2013 ER - TY - JOUR AU - Shindo, C. AU - Lister, C. AU - Crevillen, P. AU - Nordborg, M. AU - Dean, C. PY - 2006 DA - 2006// TI - Variation in the epigenetic silencing of FLC contributes to natural variation in Arabidopsis vernalization response JO - Genes Dev VL - 20 UR - https://doi.org/10.1101/gad.405306 DO - 10.1101/gad.405306 ID - Shindo2006 ER - TY - JOUR AU - Seren, Ü. AU - Vilhjálmsson, B. J. AU - Horton, M. W. AU - Meng, D. AU - Forai, P. AU - Huang, Y. S. PY - 2012 DA - 2012// TI - GWAPP: a web application for genome-wide association mapping in Arabidopsis JO - Plant Cell VL - 24 UR - https://doi.org/10.1105/tpc.112.108068 DO - 10.1105/tpc.112.108068 ID - Seren2012 ER - TY - JOUR AU - Weisenfeld, N. I. AU - Yin, S. AU - Sharpe, T. AU - Lau, B. AU - Hegarty, R. AU - Holmes, L. PY - 2014 DA - 2014// TI - Comprehensive variation discovery in single human genomes JO - Nat Genet VL - 46 UR - https://doi.org/10.1038/ng.3121 DO - 10.1038/ng.3121 ID - Weisenfeld2014 ER - TY - JOUR AU - Dai, N. AU - Wang, W. AU - Patterson, S. E. AU - Bleecker, A. B. PY - 2013 DA - 2013// TI - The TMK subfamily of receptor-like kinases in Arabidopsis display an essential role in growth and a reduced sensitivity to auxin JO - PLoS One VL - 8 UR - https://doi.org/10.1371/journal.pone.0060990 DO - 10.1371/journal.pone.0060990 ID - Dai2013 ER - TY - JOUR AU - Szécsi, J. AU - Joly, C. AU - Bordji, K. AU - Varaud, E. AU - Cock, J. M. AU - Dumas, C. PY - 2006 DA - 2006// TI - BIGPETALp, a bHLH transcription factor is involved in the control of Arabidopsis petal size JO - EMBO J VL - 25 UR - https://doi.org/10.1038/sj.emboj.7601270 DO - 10.1038/sj.emboj.7601270 ID - Szécsi2006 ER - TY - JOUR AU - Varaud, E. AU - Brioudes, F. AU - Szécsi, J. AU - Leroux, J. AU - Brown, S. AU - Perrot-Rechenmann, C. PY - 2011 DA - 2011// TI - AUXIN RESPONSE FACTOR8 regulates Arabidopsis petal growth by interacting with the bHLH transcription FACTOR BIGPETALp JO - Plant Cell VL - 23 UR - https://doi.org/10.1105/tpc.110.081653 DO - 10.1105/tpc.110.081653 ID - Varaud2011 ER - TY - JOUR AU - Hase, Y. AU - Tanaka, A. AU - Baba, T. AU - Watanabe, H. PY - 2000 DA - 2000// TI - FRL1 is required for petal and sepal development in Arabidopsis JO - Plant J VL - 24 UR - https://doi.org/10.1046/j.1365-313x.2000.00851.x DO - 10.1046/j.1365-313x.2000.00851.x ID - Hase2000 ER - TY - JOUR AU - Krizek, B. A. AU - Prost, V. AU - Macias, A. PY - 2000 DA - 2000// TI - AINTEGUMENTA promotes petal identity and acts as a negative regulator of AGAMOUS JO - Plant Cell VL - 12 UR - https://doi.org/10.1105/tpc.12.8.1357 DO - 10.1105/tpc.12.8.1357 ID - Krizek2000 ER - TY - JOUR AU - Krizek, B. PY - 2009 DA - 2009// TI - AINTEGUMENTA and AINTEGUMENTA-LIKE6 act redundantly to regulate Arabidopsis floral growth and patterning JO - Plant Physiol VL - 150 UR - https://doi.org/10.1104/pp.109.141119 DO - 10.1104/pp.109.141119 ID - Krizek2009 ER - TY - JOUR AU - Carland, F. M. AU - Fujioka, S. AU - Takatsuto, S. AU - Yoshida, S. AU - Nelson, T. PY - 2002 DA - 2002// TI - The identification of CVP1 reveals a role for sterols in vascular patterning JO - Plant Cell VL - 14 UR - https://doi.org/10.1105/tpc.003939 DO - 10.1105/tpc.003939 ID - Carland2002 ER - TY - JOUR AU - Paponov, I. A. AU - Paponov, M. AU - Teale, W. AU - Menges, M. AU - Chakrabortee, S. AU - Murray, J. A. H. PY - 2008 DA - 2008// TI - Comprehensive Transcriptome analysis of Auxin responses in Arabidopsis JO - Mol Plant VL - 1 UR - https://doi.org/10.1093/mp/ssm021 DO - 10.1093/mp/ssm021 ID - Paponov2008 ER - TY - JOUR AU - Liao, C. -. Y. AU - Smet, W. AU - Brunoud, G. AU - Yoshida, S. AU - Vernoux, T. AU - Weijers, D. PY - 2015 DA - 2015// TI - Reporters for sensitive and quantitative measurement of auxin response JO - Nat Methods VL - 12 UR - https://doi.org/10.1038/nmeth.3279 DO - 10.1038/nmeth.3279 ID - Liao2015 ER - TY - JOUR AU - Atwell, S. AU - Huang, Y. S. AU - Vilhjálmsson, B. J. AU - Willems, G. AU - Horton, M. AU - Li, Y. PY - 2010 DA - 2010// TI - Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines JO - Nature. VL - 465 UR - https://doi.org/10.1038/nature08800 DO - 10.1038/nature08800 ID - Atwell2010 ER - TY - JOUR AU - Demidchik, V. AU - Davenport, R. J. AU - Tester, M. PY - 2002 DA - 2002// TI - Nonselective cation channels in plants JO - Annu Rev Plant Biol VL - 53 UR - https://doi.org/10.1146/annurev.arplant.53.091901.161540 DO - 10.1146/annurev.arplant.53.091901.161540 ID - Demidchik2002 ER - TY - JOUR AU - Jones, A. M. AU - Xuan, Y. AU - Xu, M. AU - Wang, R. -. S. AU - Ho, C. -. H. AU - Lalonde, S. PY - 2014 DA - 2014// TI - Border control--a membrane-linked interactome of Arabidopsis JO - Science. VL - 344 UR - https://doi.org/10.1126/science.1251358 DO - 10.1126/science.1251358 ID - Jones2014 ER - TY - JOUR AU - Rao, S. AU - Zhou, Z. AU - Miao, P. AU - Bi, G. AU - Hu, M. AU - Wu, Y. PY - 2018 DA - 2018// TI - Roles of receptor-like cytoplasmic kinase VII members in pattern-triggered immune signaling JO - Plant Physiol VL - 177 ID - Rao2018 ER - TY - JOUR AU - Veronese, P. AU - Nakagami, H. AU - Bluhm, B. AU - Abuqamar, S. AU - Chen, X. AU - Salmeron, J. PY - 2006 DA - 2006// TI - The membrane-anchored BOTRYTIS-INDUCED KINASE1 plays distinct roles in Arabidopsis resistance to necrotrophic and biotrophic pathogens JO - Plant Cell VL - 18 UR - https://doi.org/10.1105/tpc.105.035576 DO - 10.1105/tpc.105.035576 ID - Veronese2006 ER - TY - JOUR AU - Grones, P. AU - Friml, J. PY - 2015 DA - 2015// TI - Auxin transporters and binding proteins at a glance JO - J Cell Sci VL - 128 UR - https://doi.org/10.1242/jcs.159418 DO - 10.1242/jcs.159418 ID - Grones2015 ER - TY - JOUR AU - Schneeberger, K. AU - Ossowski, S. AU - Ott, F. AU - Klein, J. D. AU - Wang, X. AU - Lanz, C. PY - 2011 DA - 2011// TI - Reference-guided assembly of four diverse Arabidopsis thaliana genomes JO - Proc Natl Acad Sci U S A VL - 108 UR - https://doi.org/10.1073/pnas.1107739108 DO - 10.1073/pnas.1107739108 ID - Schneeberger2011 ER - TY - JOUR AU - Dechering, K. J. AU - Cuelenaere, K. AU - Konings, R. N. AU - Leunissen, J. A. PY - 1998 DA - 1998// TI - Distinct frequency-distributions of homopolymeric DNA tracts in different genomes JO - Nucleic Acids Res VL - 26 UR - https://doi.org/10.1093/nar/26.17.4056 DO - 10.1093/nar/26.17.4056 ID - Dechering1998 ER - TY - JOUR AU - Hase, Y. AU - Fujioka, S. AU - Yoshida, S. AU - Sun, G. AU - Umeda, M. AU - Tanaka, A. PY - 2005 DA - 2005// TI - Ectopic endoreduplication caused by sterol alteration results in serrated petals in Arabidopsis JO - J Exp Bot VL - 56 UR - https://doi.org/10.1093/jxb/eri122 DO - 10.1093/jxb/eri122 ID - Hase2005 ER - TY - JOUR AU - Wójcikowska, B. AU - Gaj, M. D. PY - 2017 DA - 2017// TI - Expression profiling of AUXIN RESPONSE FACTOR genes during somatic embryogenesis induction in Arabidopsis JO - Plant Cell Rep VL - 36 UR - https://doi.org/10.1007/s00299-017-2114-3 DO - 10.1007/s00299-017-2114-3 ID - Wójcikowska2017 ER - TY - JOUR AU - Yamaguchi, N. AU - Jeong, C. W. AU - Nole-Wilson, S. AU - Krizek, B. A. AU - Wagner, D. PY - 2016 DA - 2016// TI - AINTEGUMENTA and AINTEGUMENTA-LIKE6/PLETHORA3 induce LEAFY expression in response to Auxin to promote the onset of flower formation in Arabidopsis JO - Plant Physiol VL - 170 UR - https://doi.org/10.1104/pp.15.00969 DO - 10.1104/pp.15.00969 ID - Yamaguchi2016 ER - TY - JOUR AU - Ito, T. AU - Wellmer, F. AU - Yu, H. AU - Das, P. AU - Ito, N. AU - Alves-Ferreira, M. PY - 2004 DA - 2004// TI - The homeotic protein AGAMOUS controls microsporogenesis by regulation of SPOROCYTELESS JO - Nature. VL - 430 UR - https://doi.org/10.1038/nature02733 DO - 10.1038/nature02733 ID - Ito2004 ER - TY - JOUR AU - Bomblies, K. AU - Yant, L. AU - Laitinen, R. A. AU - Kim, S. -. T. AU - Hollister, J. D. AU - Warthmann, N. PY - 2010 DA - 2010// TI - Local-scale patterns of genetic variability, outcrossing, and spatial structure in natural stands of Arabidopsis thaliana JO - PLoS Genet VL - 6 UR - https://doi.org/10.1371/journal.pgen.1000890 DO - 10.1371/journal.pgen.1000890 ID - Bomblies2010 ER - TY - STD TI - Hoffmann MH, Bremer M, Schneider K, Burger F, Stolle E, Moritz G. Flower Visitors in a Natural Population of Arabidopsisthaliana. ID - ref40 ER - TY - JOUR AU - Clough, S. J. AU - Bent, A. F. PY - 1998 DA - 1998// TI - Floral dip: a simplified method for agrobacterium-mediated transformation of Arabidopsis thaliana JO - Plant J VL - 16 UR - https://doi.org/10.1046/j.1365-313x.1998.00343.x DO - 10.1046/j.1365-313x.1998.00343.x ID - Clough1998 ER - TY - JOUR AU - Pfaffl, M. W. PY - 2001 DA - 2001// TI - A new mathematical model for relative quantification in real-time RT–PCR JO - Nucleic Acids Res VL - 29 UR - https://doi.org/10.1093/nar/29.9.e45 DO - 10.1093/nar/29.9.e45 ID - Pfaffl2001 ER - TY - JOUR AU - Clavijo, B. J. AU - Venturini, L. AU - Schudoma, C. AU - Accinelli, G. G. AU - Kaithakottil, G. AU - Wright, J. PY - 2017 DA - 2017// TI - An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations JO - Genome Res VL - 27 UR - https://doi.org/10.1101/gr.217117.116 DO - 10.1101/gr.217117.116 ID - Clavijo2017 ER - TY - JOUR AU - Simpson, J. T. AU - Wong, K. AU - Jackman, S. D. AU - Schein, J. E. AU - Jones, S. J. M. AU - Birol, I. PY - 2009 DA - 2009// TI - ABySS: a parallel assembler for short read sequence data JO - Genome Res VL - 19 UR - https://doi.org/10.1101/gr.089532.108 DO - 10.1101/gr.089532.108 ID - Simpson2009 ER - TY - JOUR AU - Edgar, R. C. PY - 2004 DA - 2004// TI - MUSCLE: a multiple sequence alignment method with reduced time and space complexity JO - BMC Bioinformatics VL - 5 UR - https://doi.org/10.1186/1471-2105-5-113 DO - 10.1186/1471-2105-5-113 ID - Edgar2004 ER - TY - JOUR AU - Wu, F. -. H. AU - Shen, S. -. C. AU - Lee, L. -. Y. AU - Lee, S. -. H. AU - Chan, M. -. T. AU - Lin, C. -. S. PY - 2009 DA - 2009// TI - Tape-Arabidopsis Sandwich - a simpler Arabidopsis protoplast isolation method JO - Plant Methods VL - 5 UR - https://doi.org/10.1186/1746-4811-5-16 DO - 10.1186/1746-4811-5-16 ID - Wu2009 ER -