Table 1 Summary of EST-SSR searching results in S. oblata transcripts
From: Development of EST-SSR markers and association mapping with floral traits in Syringa oblata
Searching items | Numbers |
|---|---|
Total number of sequences examined | 104,691 |
Total size of examined sequences (bp) | 89,306,170 |
Total number of identified SSRs | 10,988 |
Number of SSR containing sequences | 9864 (9.4%) |
Number of sequences containing more than 1 SSR | 977 |
Frequency of SSRs | 1/8.13 kb |
Di-nucleotide | 3611 (32.86%) |
Tri-nucleotide | 1986 (18.08%) |
Tetra-nucleotide | 1181 (10.75%) |
Penta-nucleotide | 2555 (23.25%) |
Hexa-nucleotide | 1655 (15.06%) |