TY - STD TI - Klaus KV, Schulz C, Bauer DS, Stützel T. Historical biogeography of the ancient lycophyte genus Selaginella : early adaptation to xeric habitats on Pangea. Cladistics. 2016. https://doi.org/10.1111/cla.12184. ID - ref1 ER - TY - JOUR AU - Banks, J. A. PY - 2009 DA - 2009// TI - Selaginella and 400 million years of separation JO - Annu Rev Plant Biol VL - 60 UR - https://doi.org/10.1146/annurev.arplant.59.032607.092851 DO - 10.1146/annurev.arplant.59.032607.092851 ID - Banks2009 ER - TY - JOUR AU - Arrigo, N. AU - Therrien, J. AU - Anderson, C. L. AU - Windham, M. D. AU - Haufler, C. H. AU - Barker, M. S. PY - 2013 DA - 2013// TI - A total evidence approach to understanding phylogenetic relationships and ecological diversity in Selaginella subg. Tetragonostachys JO - Am J Bot VL - 100 UR - https://doi.org/10.3732/ajb.1200426 DO - 10.3732/ajb.1200426 ID - Arrigo2013 ER - TY - JOUR AU - Weststrand, S. AU - Korall, P. PY - 2016 DA - 2016// TI - Phylogeny of Selaginellaceae: there is value in morphology after all! JO - Am J Bot VL - 103 UR - https://doi.org/10.3732/ajb.1600156 DO - 10.3732/ajb.1600156 ID - Weststrand2016 ER - TY - JOUR AU - Korall, P. AU - Kenrick, P. PY - 2002 DA - 2002// TI - Phylogenetic relationships in Selaginellaceae based on rbcL sequences JO - Am J Bot VL - 89 UR - https://doi.org/10.3732/ajb.89.3.506 DO - 10.3732/ajb.89.3.506 ID - Korall2002 ER - TY - STD TI - Zhou X-M, Rothfels CJ, Zhang L, He Z-R, Le Péchon T, He H, et al. A large-scale phylogeny of the lycophyte genus Selaginella (Selaginellaceae: Lycopodiopsida) based on plastid and nuclear loci. Cladistics. 2015;32:360–89. ID - ref6 ER - TY - JOUR AU - Weng, J. -. K. AU - Noel, J. P. PY - 2013 DA - 2013// TI - Chemodiversity in Selaginella: a reference system for parallel and convergent metabolic evolution in terrestrial plants JO - Front Plant Sci VL - 4 UR - https://doi.org/10.3389/fpls.2013.00119 DO - 10.3389/fpls.2013.00119 ID - Weng2013 ER - TY - JOUR AU - Baniaga, A. E. AU - Arrigo, N. AU - Barker, M. S. PY - 2016 DA - 2016// TI - The small nuclear genomes of Selaginella are associated with a low rate of genome size evolution JO - Genome Biol Evol VL - 8 UR - https://doi.org/10.1093/gbe/evw091 DO - 10.1093/gbe/evw091 ID - Baniaga2016 ER - TY - JOUR AU - Oliver, M. J. AU - Tuba, Z. AU - Mishler, B. D. PY - 2000 DA - 2000// TI - The evolution of vegetative desiccation tolerance in land plants JO - Plant Ecol VL - 151 UR - https://doi.org/10.1023/A:1026550808557 DO - 10.1023/A:1026550808557 ID - Oliver2000 ER - TY - CHAP AU - Proctor, M. C. F. AU - Pence, V. C. ED - Black, M. ED - Pritchard, H. W. PY - 2002 DA - 2002// TI - Vegetative tissues: bryophytes, vascular resurrection plants and vegetative propagules BT - Desiccation and survival in plants: drying without dying PB - CABI CY - Wallingford UR - https://doi.org/10.1079/9780851995342.0207 DO - 10.1079/9780851995342.0207 ID - Proctor2002 ER - TY - JOUR AU - Pandey, V. AU - Ranjan, S. AU - Deeba, F. AU - Pandey, A. K. AU - Singh, R. AU - Shirke, P. A. PY - 2010 DA - 2010// TI - Desiccation-induced physiological and biochemical changes in resurrection plant, Selaginella bryopteris JO - J Plant Physiol VL - 167 UR - https://doi.org/10.1016/j.jplph.2010.05.001 DO - 10.1016/j.jplph.2010.05.001 ID - Pandey2010 ER - TY - JOUR AU - Plancot, B. AU - Gügi, B. AU - Mollet, J. C. AU - Loutelier-Bourhis, C. AU - Ramasandra Govind, S. AU - Lerouge, P. PY - 2019 DA - 2019// TI - Desiccation tolerance in plants: structural characterization of the cell wall hemicellulosic polysaccharides in three Selaginella species JO - Carbohydr Polym VL - 208 UR - https://doi.org/10.1016/j.carbpol.2018.12.051 DO - 10.1016/j.carbpol.2018.12.051 ID - Plancot2019 ER - TY - JOUR AU - Yobi, A. AU - Wone, B. W. M. AU - Xu, W. AU - Alexander, D. C. AU - Guo, L. AU - Ryals, J. A. PY - 2012 DA - 2012// TI - Comparative metabolic profiling between desiccation-sensitive and desiccation-tolerant species of Selaginella reveals insights into the resurrection trait JO - Plant J VL - 72 UR - https://doi.org/10.1111/tpj.12008 DO - 10.1111/tpj.12008 ID - Yobi2012 ER - TY - JOUR AU - Dinakar, C. AU - Djilianov, D. AU - Bartels, D. PY - 2012 DA - 2012// TI - Photosynthesis in desiccation tolerant plants: energy metabolism and antioxidative stress defense JO - Plant Sci VL - 182 UR - https://doi.org/10.1016/j.plantsci.2011.01.018 DO - 10.1016/j.plantsci.2011.01.018 ID - Dinakar2012 ER - TY - JOUR AU - Lebkuecher, J. G. AU - Eickmeier, W. G. PY - 1991 DA - 1991// TI - Reduced photoinhibition with stem curling in the resurrection plant Selaginella lepidophylla JO - Oecologia. VL - 88 UR - https://doi.org/10.1007/BF00317725 DO - 10.1007/BF00317725 ID - Lebkuecher1991 ER - TY - JOUR AU - Rafsanjani, A. AU - Brulé, V. AU - Western, T. L. AU - Pasini, D. PY - 2015 DA - 2015// TI - Hydro-responsive curling of the resurrection plant Selaginella lepidophylla JO - Sci Rep VL - 5 UR - https://doi.org/10.1038/srep08064 DO - 10.1038/srep08064 ID - Rafsanjani2015 ER - TY - BOOK AU - Bartels, D. AU - Hussain, S. S. PY - 2011 DA - 2011// TI - Resurrection plants: physiology and molecular biology PB - Springer CY - Berlin Heidelberg UR - https://doi.org/10.1007/978-3-642-19106-0_16 DO - 10.1007/978-3-642-19106-0_16 ID - Bartels2011 ER - TY - JOUR AU - VanBuren, R. AU - Wai, C. M. AU - Ou, S. AU - Pardo, J. AU - Bryant, D. AU - Jiang, N. PY - 2018 DA - 2018// TI - Extreme haplotype variation in the desiccation-tolerant clubmoss Selaginella lepidophylla JO - Nat Commun VL - 9 UR - https://doi.org/10.1038/s41467-017-02546-5 DO - 10.1038/s41467-017-02546-5 ID - VanBuren2018 ER - TY - JOUR AU - Xu, Z. AU - Xin, T. AU - Bartels, D. AU - Li, Y. AU - Gu, W. AU - Yao, H. PY - 2018 DA - 2018// TI - Genome analysis of the ancient Tracheophyte Selaginella tamariscina reveals evolutionary features relevant to the Acquisition of Desiccation Tolerance JO - Mol Plant VL - 11 UR - https://doi.org/10.1016/J.MOLP.2018.05.003 DO - 10.1016/J.MOLP.2018.05.003 ID - Xu2018 ER - TY - STD TI - Silva Artur MA, Costa M-CD, Farrant JM, Hilhorst HWM. Genome-level responses to the environment: plant desiccation tolerance. Emerg Top Life Sci. 2019;3:153–63. ID - ref20 ER - TY - JOUR AU - VanBuren, R. AU - Pardo, J. AU - Man Wai, C. AU - Evans, S. AU - Bartels, D. PY - 2019 DA - 2019// TI - Massive tandem proliferation of ELIPs supports convergent evolution of desiccation tolerance across land plants JO - Plant Physiol VL - 179 UR - https://doi.org/10.1104/pp.18.01420 DO - 10.1104/pp.18.01420 ID - VanBuren2019 ER - TY - JOUR AU - Zhou, X. -. M. AU - Zhang, L. -. B. PY - 2015 DA - 2015// TI - A classification of Selaginella (Selaginellaceae) based on molecular (chloroplast and nuclear), macromorphological, and spore features JO - Taxon VL - 64 UR - https://doi.org/10.12705/646.2 DO - 10.12705/646.2 ID - Zhou2015 ER - TY - BOOK AU - Mickel, J. T. AU - Smith, A. R. PY - 2004 DA - 2004// TI - The Pteridophytes of Mexico. Part I (descriptions and maps) PB - The New York Botanical Garden Press CY - New York ID - Mickel2004 ER - TY - JOUR AU - DP, Q. AU - Carollo, C. A. AU - MCT, K. AU - Rizk, Y. S. AU - VCP, A. AU - PE, M. PY - 2016 DA - 2016// TI - In vivo antileishmanial activity and chemical profile of polar extract from Selaginella sellowii JO - Mem Inst Oswaldo Cruz VL - 111 UR - https://doi.org/10.1590/0074-02760150307 DO - 10.1590/0074-02760150307 ID - DP2016 ER - TY - JOUR AU - Gaff, D. F. PY - 1987 DA - 1987// TI - Desiccation tolerant plants in South America JO - Oecologia. VL - 74 UR - https://doi.org/10.1007/BF00377357 DO - 10.1007/BF00377357 ID - Gaff1987 ER - TY - JOUR AU - López-Sáez, J. A. AU - Pérez-Alonso, M. J. AU - Negueruela, A. V. PY - 1994 DA - 1994// TI - Biflavonoids of Selaginella denticulata Growing in Spain JO - Zeitschrift für Naturforsch C VL - 49 UR - https://doi.org/10.1515/znc-1994-3-417 DO - 10.1515/znc-1994-3-417 ID - López-Sáez1994 ER - TY - JOUR AU - Vander Willigen, C. AU - Pammenter, N. W. AU - Mundree, S. AU - Farrant, J. PY - 2001 DA - 2001// TI - Some physiological comparisons between the resurrection grass, Eragrostis nindensis, and the related desiccation-sensitive species, E curvula JO - Plant Growth Regul VL - 35 UR - https://doi.org/10.1023/A:1014425619913 DO - 10.1023/A:1014425619913 ID - Vander Willigen2001 ER - TY - JOUR AU - Dinakar, C. AU - Bartels, D. PY - 2012 DA - 2012// TI - Light response, oxidative stress management and nucleic acid stability in closely related Linderniaceae species differing in desiccation tolerance JO - Planta. VL - 236 UR - https://doi.org/10.1007/s00425-012-1628-8 DO - 10.1007/s00425-012-1628-8 ID - Dinakar2012 ER - TY - JOUR AU - Oliver, M. J. AU - Guo, L. AU - Alexander, D. C. AU - Ryals, J. A. AU - Wone, B. W. M. AU - Cushman, J. C. PY - 2011 DA - 2011// TI - A sister group contrast using untargeted global Metabolomic analysis delineates the biochemical regulation underlying desiccation tolerance in Sporobolus stapfianus JO - Plant Cell VL - 23 UR - https://doi.org/10.1105/tpc.110.082800 DO - 10.1105/tpc.110.082800 ID - Oliver2011 ER - TY - JOUR AU - Dries, N. AU - Facchinelli, F. AU - Giarola, V. AU - Phillips, J. R. AU - Bartels, D. PY - 2011 DA - 2011// TI - Comparative analysis of LEA-like 11-24 gene expression and regulation in related plant species within the Linderniaceae that differ in desiccation tolerance JO - New Phytol VL - 190 UR - https://doi.org/10.1111/j.1469-8137.2010.03595.x DO - 10.1111/j.1469-8137.2010.03595.x ID - Dries2011 ER - TY - JOUR AU - Juszczak, I. AU - Bartels, D. PY - 2017 DA - 2017// TI - LEA gene expression, RNA stability and pigment accumulation in three closely related Linderniaceae species differing in desiccation tolerance JO - Plant Sci VL - 255 UR - https://doi.org/10.1016/j.plantsci.2016.10.003 DO - 10.1016/j.plantsci.2016.10.003 ID - Juszczak2017 ER - TY - JOUR AU - VanBuren, R. AU - Wai, C. M. AU - Pardo, J. AU - Giarola, V. AU - Ambrosini, S. AU - Song, X. PY - 2018 DA - 2018// TI - Desiccation tolerance evolved through gene duplication and network rewiring in Lindernia JO - Plant Cell VL - 30 UR - https://doi.org/10.1105/tpc.18.00517 DO - 10.1105/tpc.18.00517 ID - VanBuren2018 ER - TY - STD TI - Pardo J, Wai CM, Chay H, Madden CF, Hilhorst HWM, Farrant JM, et al. Intertwined signatures of desiccation and drought tolerance in grasses. bioRxiv. 2019:662379. https://doi.org/10.1101/662379. ID - ref33 ER - TY - JOUR AU - Xiao, L. AU - Yobi, A. AU - Koster, K. L. AU - He, Y. AU - Oliver, M. J. PY - 2018 DA - 2018// TI - Desiccation tolerance in Physcomitrella patens : rate of dehydration and the involvement of endogenous abscisic acid (ABA) JO - Plant Cell Environ VL - 41 UR - https://doi.org/10.1111/pce.13096 DO - 10.1111/pce.13096 ID - Xiao2018 ER - TY - JOUR AU - Grabherr, M. G. AU - Haas, B. J. AU - Yassour, M. AU - Levin, J. Z. AU - Thompson, D. A. AU - Amit, I. PY - 2011 DA - 2011// TI - Full-length transcriptome assembly from RNA-Seq data without a reference genome JO - Nat Biotechnol VL - 29 UR - https://doi.org/10.1038/nbt.1883 DO - 10.1038/nbt.1883 ID - Grabherr2011 ER - TY - JOUR AU - Xie, Y. AU - Wu, G. AU - Tang, J. AU - Luo, R. AU - Patterson, J. AU - Liu, S. PY - 2014 DA - 2014// TI - SOAPdenovo-trans: de novo transcriptome assembly with short RNA-Seq reads JO - Bioinformatics. VL - 30 UR - https://doi.org/10.1093/bioinformatics/btu077 DO - 10.1093/bioinformatics/btu077 ID - Xie2014 ER - TY - JOUR AU - Simão, F. A. AU - Waterhouse, R. M. AU - Ioannidis, P. AU - Kriventseva, E. V. AU - Zdobnov, E. M. PY - 2015 DA - 2015// TI - BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs JO - Bioinformatics. VL - 31 UR - https://doi.org/10.1093/bioinformatics/btv351 DO - 10.1093/bioinformatics/btv351 ID - Simão2015 ER - TY - JOUR AU - Banks, J. A. AU - Nishiyama, T. AU - Hasebe, M. AU - Bowman, J. L. AU - Gribskov, M. AU - Pamphilis, C. PY - 2011 DA - 2011// TI - The Selaginella genome identifies genetic changes associated with the evolution of vascular plants JO - Science VL - 332 UR - https://doi.org/10.1126/science.1203810 DO - 10.1126/science.1203810 ID - Banks2011 ER - TY - JOUR AU - Emms, D. M. AU - Kelly, S. PY - 2015 DA - 2015// TI - OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy JO - Genome Biol VL - 16 UR - https://doi.org/10.1186/s13059-015-0721-2 DO - 10.1186/s13059-015-0721-2 ID - Emms2015 ER - TY - JOUR AU - González-Morales, S. I. AU - Chávez-Montes, R. A. AU - Hayano-Kanashiro, C. AU - Alejo-Jacuinde, G. AU - Rico-Cambron, T. Y. AU - Folter, S. PY - 2016 DA - 2016// TI - Regulatory network analysis reveals novel regulators of seed desiccation tolerance in Arabidopsis thaliana JO - Proc Natl Acad Sci VL - 113 UR - https://doi.org/10.1073/pnas.1610985113 DO - 10.1073/pnas.1610985113 ID - González-Morales2016 ER - TY - JOUR AU - Chen, P. AU - Jung, N. U. AU - Giarola, V. AU - Bartels, D. PY - 2020 DA - 2020// TI - The dynamic responses of cell walls in resurrection plants during dehydration and rehydration JO - Front Plant Sci VL - 10 UR - https://doi.org/10.3389/fpls.2019.01698 DO - 10.3389/fpls.2019.01698 ID - Chen2020 ER - TY - JOUR AU - Mitra, J. AU - Xu, G. AU - Wang, B. AU - Li, M. AU - Deng, X. PY - 2013 DA - 2013// TI - Understanding desiccation tolerance using the resurrection plant Boea hygrometrica as a model system JO - Front Plant Sci VL - 4 UR - https://doi.org/10.3389/fpls.2013.00446 DO - 10.3389/fpls.2013.00446 ID - Mitra2013 ER - TY - JOUR AU - Brulé, V. AU - Rafsanjani, A. AU - Asgari, M. AU - Western, T. L. AU - Pasini, D. PY - 2019 DA - 2019// TI - Three-dimensional functional gradients direct stem curling in the resurrection plant Selaginella lepidophylla JO - J R Soc Interface VL - 16 UR - https://doi.org/10.1098/rsif.2019.0454 DO - 10.1098/rsif.2019.0454 ID - Brulé2019 ER - TY - JOUR AU - Honaas, L. A. AU - Wafula, E. K. AU - Wickett, N. J. AU - JP, Z. Y. AU - Edger, P. P. PY - 2016 DA - 2016// TI - Selecting Superior De Novo Transcriptome Assemblies: Lessons Learned by Leveraging the Best Plant Genome JO - PLoS One VL - 11 UR - https://doi.org/10.1371/journal.pone.0146062 DO - 10.1371/journal.pone.0146062 ID - Honaas2016 ER - TY - JOUR AU - Li, B. AU - Fillmore, N. AU - Bai, Y. AU - Collins, M. AU - Thomson, J. A. AU - Stewart, R. PY - 2014 DA - 2014// TI - Evaluation of de novo transcriptome assemblies from RNA-Seq data JO - Genome Biol VL - 15 UR - https://doi.org/10.1186/s13059-014-0553-5 DO - 10.1186/s13059-014-0553-5 ID - Li2014 ER - TY - JOUR AU - Battaglia, M. AU - Olvera-Carrillo, Y. AU - Garciarrubio, A. AU - Campos, F. AU - Covarrubias, A. A. PY - 2008 DA - 2008// TI - The enigmatic LEA proteins and other Hydrophilins JO - Plant Physiol VL - 148 UR - https://doi.org/10.1104/pp.108.120725 DO - 10.1104/pp.108.120725 ID - Battaglia2008 ER - TY - CHAP AU - Phillips, J. R. AU - Oliver, M. J. AU - Bartels, D. ED - Black, M. ED - Pritchard, H. W. PY - 2002 DA - 2002// TI - Molecular genetics of desiccation and tolerant systems BT - Desiccation and survival in plants: drying without dying PB - CABI CY - Wallingford UR - https://doi.org/10.1079/9780851995342.0319 DO - 10.1079/9780851995342.0319 ID - Phillips2002 ER - TY - JOUR AU - Giarola, V. AU - Hou, Q. AU - Bartels, D. PY - 2017 DA - 2017// TI - Angiosperm plant desiccation tolerance: hints from Transcriptomics and genome sequencing JO - Trends Plant Sci VL - 22 UR - https://doi.org/10.1016/j.tplants.2017.05.007 DO - 10.1016/j.tplants.2017.05.007 ID - Giarola2017 ER - TY - JOUR AU - Farrant, J. M. AU - Moore, J. P. PY - 2011 DA - 2011// TI - Programming desiccation-tolerance: from plants to seeds to resurrection plants JO - Curr Opin Plant Biol VL - 14 UR - https://doi.org/10.1016/j.pbi.2011.03.018 DO - 10.1016/j.pbi.2011.03.018 ID - Farrant2011 ER - TY - JOUR AU - Yobi, A. AU - Wone, B. W. M. AU - Xu, W. AU - Alexander, D. C. AU - Guo, L. AU - Ryals, J. A. PY - 2013 DA - 2013// TI - Metabolomic profiling in Selaginella lepidophylla at various hydration states provides new insights into the mechanistic basis of desiccation tolerance JO - Mol Plant VL - 6 UR - https://doi.org/10.1093/mp/sss155 DO - 10.1093/mp/sss155 ID - Yobi2013 ER - TY - JOUR AU - Wang, X. AU - Chen, S. AU - Zhang, H. AU - Shi, L. AU - Cao, F. AU - Guo, L. PY - 2010 DA - 2010// TI - Desiccation tolerance mechanism in resurrection fern-ally Selaginella tamariscina revealed by physiological and proteomic analysis JO - J Proteome Res VL - 9 UR - https://doi.org/10.1021/pr100767k DO - 10.1021/pr100767k ID - Wang2010 ER - TY - JOUR AU - Iturriaga, G. AU - Cushman, M. A. F. AU - Cushman, J. C. PY - 2006 DA - 2006// TI - An EST catalogue from the resurrection plant Selaginella lepidophylla reveals abiotic stress-adaptive genes JO - Plant Sci VL - 170 UR - https://doi.org/10.1016/j.plantsci.2006.02.004 DO - 10.1016/j.plantsci.2006.02.004 ID - Iturriaga2006 ER - TY - JOUR AU - Anderberg, H. I. AU - Kjellbom, P. AU - Johanson, U. PY - 2012 DA - 2012// TI - Annotation of Selaginella moellendorffii major intrinsic proteins and the evolution of the protein family in terrestrial plants JO - Front Plant Sci VL - 3 UR - https://doi.org/10.3389/fpls.2012.00033 DO - 10.3389/fpls.2012.00033 ID - Anderberg2012 ER - TY - JOUR AU - Thomson, W. W. AU - Platt, K. A. PY - 1997 DA - 1997// TI - Conservation of cell order in desiccated mesophyll of Selaginella lepidophylla ([Hook and Grev.] Spring) JO - Ann Bot VL - 79 UR - https://doi.org/10.1006/anbo.1996.0375 DO - 10.1006/anbo.1996.0375 ID - Thomson1997 ER - TY - JOUR AU - Neeragunda Shivaraj, Y. AU - Barbara, P. AU - Gugi, B. AU - Vicré-Gibouin, M. AU - Driouich, A. AU - Ramasandra Govind, S. PY - 2018 DA - 2018// TI - Perspectives on structural, physiological, cellular, and molecular responses to desiccation in resurrection plants JO - Scientifica. VL - 2018 UR - https://doi.org/10.1155/2018/9464592 DO - 10.1155/2018/9464592 ID - Neeragunda Shivaraj2018 ER - TY - JOUR AU - Challabathula, D. AU - Zhang, Q. AU - Bartels, D. PY - 2018 DA - 2018// TI - Protection of photosynthesis in desiccation-tolerant resurrection plants JO - J Plant Physiol VL - 227 UR - https://doi.org/10.1016/J.JPLPH.2018.05.002 DO - 10.1016/J.JPLPH.2018.05.002 ID - Challabathula2018 ER - TY - JOUR AU - Rodriguez, M. C. S. AU - Edsgärd, D. AU - Hussain, S. S. AU - Alquezar, D. AU - Rasmussen, M. AU - Gilbert, T. PY - 2010 DA - 2010// TI - Transcriptomes of the desiccation-tolerant resurrection plant Craterostigma plantagineum JO - Plant J VL - 63 UR - https://doi.org/10.1111/j.1365-313X.2010.04243.x DO - 10.1111/j.1365-313X.2010.04243.x ID - Rodriguez2010 ER - TY - JOUR AU - Gechev, T. S. AU - Benina, M. AU - Obata, T. AU - Tohge, T. AU - Sujeeth, N. AU - Minkov, I. PY - 2013 DA - 2013// TI - Molecular mechanisms of desiccation tolerance in the resurrection glacial relic Haberlea rhodopensis JO - Cell Mol Life Sci VL - 70 UR - https://doi.org/10.1007/s00018-012-1155-6 DO - 10.1007/s00018-012-1155-6 ID - Gechev2013 ER - TY - JOUR AU - Ma, C. AU - Wang, H. AU - Macnish, A. J. AU - Estrada-Melo, A. C. AU - Lin, J. AU - Chang, Y. PY - 2015 DA - 2015// TI - Transcriptomic analysis reveals numerous diverse protein kinases and transcription factors involved in desiccation tolerance in the resurrection plant Myrothamnus flabellifolia JO - Hortic Res VL - 2 UR - https://doi.org/10.1038/hortres.2015.34 DO - 10.1038/hortres.2015.34 ID - Ma2015 ER - TY - JOUR AU - Zhang, Q. AU - Song, X. AU - Bartels, D. PY - 2016 DA - 2016// TI - Enzymes and metabolites in carbohydrate metabolism of desiccation tolerant plants JO - Proteomes. VL - 4 UR - https://doi.org/10.3390/PROTEOMES4040040 DO - 10.3390/PROTEOMES4040040 ID - Zhang2016 ER - TY - JOUR AU - Iturriaga, G. AU - Gaff, D. F. AU - Zentella, R. PY - 2000 DA - 2000// TI - New desiccation-tolerant plants, including a grass, in the central highlands of Mexico, accumulate trehalose JO - Aust J Bot VL - 48 UR - https://doi.org/10.1071/BT98062 DO - 10.1071/BT98062 ID - Iturriaga2000 ER - TY - JOUR AU - Liu, M. -. S. AU - Chien, C. -. T. AU - Lin, T. -. P. PY - 2008 DA - 2008// TI - Constitutive components and induced gene expression are involved in the desiccation tolerance of Selaginella tamariscina JO - Plant Cell Physiol VL - 49 UR - https://doi.org/10.1093/pcp/pcn040 DO - 10.1093/pcp/pcn040 ID - Liu2008 ER - TY - JOUR AU - Moraes, M. G. AU - Oliveira, A. A. Q. AU - Santos, M. G. PY - 2014 DA - 2014// TI - Sugars in ferns and lycophytes growing on rocky outcrops from southeastern brazilian coast JO - Biosci J VL - 30 ID - Moraes2014 ER - TY - JOUR AU - Zentella, R. AU - Mascorro-Gallardo, J. O. AU - Dijck, P. AU - Folch-Mallol, J. AU - Bonini, B. AU - Vaeck, C. PY - 1999 DA - 1999// TI - A Selaginella lepidophylla trehalose-6-phosphate synthase complements growth and stress-tolerance defects in a yeast tps1 mutant JO - Plant Physiol VL - 119 UR - https://doi.org/10.1104/pp.119.4.1473 DO - 10.1104/pp.119.4.1473 ID - Zentella1999 ER - TY - JOUR AU - López-Arredondo, D. AU - González-Morales, S. I. AU - Bello-Bello, E. AU - Alejo-Jacuinde, G. AU - Herrera, L. PY - 2015 DA - 2015// TI - Engineering food crops to grow in harsh environments JO - F1000Research VL - 4 UR - https://doi.org/10.12688/f1000research.6538.1 DO - 10.12688/f1000research.6538.1 ID - López-Arredondo2015 ER - TY - JOUR AU - Bolger, A. M. AU - Lohse, M. AU - Usadel, B. PY - 2014 DA - 2014// TI - Trimmomatic: a flexible trimmer for Illumina sequence data JO - Bioinformatics. VL - 30 UR - https://doi.org/10.1093/bioinformatics/btu170 DO - 10.1093/bioinformatics/btu170 ID - Bolger2014 ER - TY - JOUR AU - Bushmanova, E. AU - Antipov, D. AU - Lapidus, A. AU - Suvorov, V. AU - Prjibelski, A. D. PY - 2016 DA - 2016// TI - rnaQUAST: a quality assessment tool for de novo transcriptome assemblies JO - Bioinformatics. VL - 32 UR - https://doi.org/10.1093/bioinformatics/btw218 DO - 10.1093/bioinformatics/btw218 ID - Bushmanova2016 ER - TY - JOUR AU - Langmead, B. AU - Salzberg, S. L. PY - 2012 DA - 2012// TI - Fast gapped-read alignment with bowtie 2 JO - Nat Methods VL - 9 UR - https://doi.org/10.1038/nmeth.1923 DO - 10.1038/nmeth.1923 ID - Langmead2012 ER - TY - JOUR AU - Li, B. AU - Dewey, C. N. PY - 2011 DA - 2011// TI - RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome JO - BMC Bioinformatics VL - 12 UR - https://doi.org/10.1186/1471-2105-12-323 DO - 10.1186/1471-2105-12-323 ID - Li2011 ER - TY - JOUR AU - Robinson, M. D. AU - McCarthy, D. J. AU - Smyth, G. K. PY - 2010 DA - 2010// TI - edgeR: a bioconductor package for differential expression analysis of digital gene expression data JO - Bioinformatics. VL - 26 UR - https://doi.org/10.1093/bioinformatics/btp616 DO - 10.1093/bioinformatics/btp616 ID - Robinson2010 ER - TY - JOUR AU - Martínez, O. AU - Reyes-Valdés, M. H. PY - 2008 DA - 2008// TI - Defining diversity, specialization, and gene specificity in transcriptomes through information theory JO - Proc Natl Acad Sci U S A VL - 105 UR - https://doi.org/10.1073/pnas.0803479105 DO - 10.1073/pnas.0803479105 ID - Martínez2008 ER - TY - JOUR AU - Provart, N. AU - Tong, Z. PY - 2003 DA - 2003// TI - A Browser-based Functional ClassificationSuperViewer for Arabidopsis Genomics JO - Curr Comput Mol Biol VL - 2003 ID - Provart2003 ER - TY - JOUR AU - Bardou, P. AU - Mariette, J. AU - Escudié, F. AU - Djemiel, C. AU - Klopp, C. PY - 2014 DA - 2014// TI - jvenn: an interactive Venn diagram viewer JO - BMC Bioinformatics VL - 15 UR - https://doi.org/10.1186/1471-2105-15-293 DO - 10.1186/1471-2105-15-293 ID - Bardou2014 ER -