From: Gel-based proteomic map of Arabidopsis thaliana root plastids and mitochondria
Function | Spot number | Accession (UP), Gene locus (TAIR) |
---|---|---|
AMINO ACID METABOLISM | ||
 Synthesis | ||
  3-phosphoshikimate 1-carboxyvinyltransferase | 51, 52 | P05466, At2g45300 |
  4-hydroxy-tetrahydrodipicolinate reductase 1 | 86 | O80574, At2g44040 |
  Acetolactate synthase small subunit 1 | 58 | Q9FFF4, At5g16290 |
  Acetylglutamate kinase | 92 | Q9SCL7, At3g57560 |
  Acetylornithine aminotransferase | 62, 63 | Q9M8M7, At1g80600 |
  Argininosuccinate synthase | 51, 52 | Q9SZX3, At4g24830 |
  ATP phosphoribosyltransferase 1 | 62 | Q9S762, At1g58080 |
  Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | 30 | Q9SQT8, At3g06350 |
  Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase | 64, 66 | Q9SIE1, At2g22250 |
  Branched-chain-amino-acid aminotransferase 3 | 64, 66 | Q9M401, At3g49680 |
  Chorismate synthase | 71, 73 | P57720, At1g48850 |
  Cysteine synthase | 82, 83, 102 | P47999, At2g43750 |
  D-3-phosphoglycerate dehydrogenase 1 | 18, 22–24, 30, 45–47, 54, 55 | O49485, At4g34200 |
  Diaminopimelate decarboxylase 2 | 56 | Q94A94, At5g11880 |
  Diaminopimelate epimerase | 86 | Q9LFG2, At3g53580 |
  Dihydroxy-acid dehydratase | 30, 43, 45 | Q9LIR4, At3g23940 |
  Glutamine synthetase | 55 | Q43127, At5g35630 |
  Homoserine kinase | 83, 85 | Q8L7R2, At2g17265 |
  Imidazole glycerol phosphate synthase hisHF | 43–46, 56 | Q9SZ30, At4g26900 |
  Ketol-acid reductoisomerase | 36, 37 | Q05758, At3g58610 |
  Ornithine carbamoyltransferase | 85 | O50039, At1g75330 |
  Phosphoserine aminotransferase 1 | 64, 66 | Q96255, At4g35630 |
  Phosphoserine aminotransferase 2 | 66 | Q9SHP0, At2g17630 |
  Probable N-acetyl-gamma-glutamyl-phosphate reductase | 70, 71 | Q93Z70, At2g19940 |
  Threonine synthase 1 | 48–50 | Q9S7B5, At4g29840 |
  Tryptophan synthase beta chain 1 | 65 | P14671, At5g54810 |
 Regulation | ||
  ACT domain-containing protein | 88 | Q9LZ23, AT5G04740 |
CARBOHYDRATE METABOLISM | ||
 Glycolysis | ||
  Dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex | 46, 47, 63 | Q9SQI8, At3g25860 |
  Dihydrolipoyllysine-residue acetyltransferase component 5 of pyruvate dehydrogenase complex | 47, 48, 50 | Q9C8P0, At1g34430 |
  Enolase 1 | 51, 52 | Q9C9C4, At1g74030 |
  Fructose-bisphosphate aldolase 3 | 76, 83, 85, 87 | Q9ZU52, At2g01140 |
  Glucose-6-phosphate isomerase 1 | 25, 30 | Q8H103, At4g24620 |
  Glyceraldehyde-3-phosphate dehydrogenase | 71, 75, 82, 85 | Q9SAJ6, At1g79530 |
  Isocitrate dehydrogenase [NADP] | 65 | Q8LPJ5, At5g14590 |
  Phosphoglucomutase | 22 | Q9SCY0, At5g51820 |
  Plastidial pyruvate kinase 1 | 22, 23, 79 | Q9LIK0, At3g22960 |
  Plastidial pyruvate kinase 2 | 47 | Q9FLW9, At5g52920 |
  Triosephosphate isomerase | 101 | Q9SKP6, At2g21170 |
 Pentose Phosphate Pathway | ||
  Transketolase-1 | 13 | Q8RWV0, At3g60750 |
  Transketolase-2 | 20, 54 | F4IW47, At2g45290 |
 Starch Synthesis | ||
  Glucose-1-phosphate adenylyltransferase small subunit | 52 | P55228, At5g48300 |
 Others | ||
  Malate dehydrogenase | 82, 83 | Q9SN86, At3g47520 |
  Ribulose bisphosphate carboxylase large chain | 27, 49 | O03042, AtCg00490 |
PROTEIN RELATED | ||
 Degradation | ||
  ATP-dependent zinc metalloprotease FTSH 2 | 14 | O80860, At2g30950 |
  Chaperone protein ClpC2 | 8, 9 | Q9SXJ7, At3g48870 |
  Leucine aminopeptidase 2 | 47 | Q944P7, At4g30920 |
  Leucine aminopeptidase 3 | 47 | Q8RX72, At4g30910 |
 Folding | ||
  Chaperonin 60 subunit alpha 1 | 22, 24, 25, 27, 28, 30, 49 | P21238, At2g28000 |
  Chaperonin 60 subunit beta 2 | 22, 23, 28, 89 | Q9LJE4, At3g13470 |
  Chaperonin 60 subunit beta 3 | 28, 30 | C0Z361, At5g56500 |
  Peptidyl-prolyl cis-trans isomerase CYP37 | 79 | P82869, At3g15520 |
 Synthesis | ||
  Glutamyl-tRNA (Gln) amidotransferase subunit A | 46, 47 | Q9LI77, At3g25660 |
LIPID METABOLISM | ||
 3-oxoacyl-[acyl-carrier-protein] reductase | 97 | P33207, At1g24360 |
 3-oxoacyl-[acyl-carrier-protein] synthase I | 59, 85 | P52410, At5g46290 |
 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta | 47, 59 | P56765, AtCg00500 |
 Biotin carboxyl carrier protein of acetyl-CoA carboxylase 1 | 86 | Q42533, At5g16390 |
 Biotin carboxylase | 47 | O04983, At5g35360 |
 Enoyl-[acyl-carrier-protein] reductase [NADH] | 82, 83 | Q9SLA8, At2g05990 |
 Pyruvate dehydrogenase E1 component subunit beta-3 | 79 | O64688, At2g34590 |
ENERGETICS | ||
 ATP synthesis | ||
  ATP synthase subunit alpha | 22, 30, 49, 86 | P56757, AtCg00120 |
  ATP synthase subunit beta | 43–45, 49 | P19366, AtCg00480 |
 Electron Transfer | ||
  Adenylate kinase 2 | 102 | Q9FIJ7, At5g47840 |
  Ferredoxin-NADP reductase, root isozyme 1 | 77 | Q9M0V6, At4g05390 |
  Ferredoxin-NADP reductase, root isozyme 2 | 78 | Q9S9P8, At1g30510 |
STRESS RELATED | ||
 Abiotic Stress Response | ||
  Heat shock 70 kDa protein 6 | 12, 13, 24 | Q9STW6, At4g24280 |
  Heat shock 70 kDa protein 7 | 12, 13 | Q9LTX9, At5g49910 |
  Probable plastid-lipid-associated protein 1 | 88 | O81439, At4g04020 |
 Redox Regulation | ||
  Glutathione reductase | 49, 50 | P42770, At3g54660 |
  Glutamate-cysteine ligase | 51, 52 | P46309, At4g23100 |
SECONDARY METABOLISM | ||
 3-isopropylmalate dehydratase large subunit | 48–50 | Q94AR8, At4g13430 |
 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | 52 | Q94B35, At4g34350 |
 Isopentenyl-diphosphate delta-isomerase II | 89 | Q42553, At3g02780 |
 Protein strictosidine synthase-like 12 | 82 | P94111, At1g74020 |
NUCLEIC ACID RELATED | ||
 Adenylosuccinate synthetase | 56–58 | Q96529, At3g57610 |
 Carbamoyl-phosphate synthase small chain | 52 | Q9LVW7, At3g27740 |
 Dihydropyrimidine dehydrogenase | 56, 64, 65 | Q9LVI9, At3g17810 |
 Soluble inorganic pyrophosphatase 6 | 88 | Q9LXC9, At5g09650 |
NITROGEN METABOLISM | ||
 Ferredoxin-nitrite reductase | 45, 51, 52 | Q39161, At2g15620 |
C1 METABOLISM | ||
 Bifunctional protein FolD 4 | 71, 75 | O65271, At4g00620 |
 iron sulfur cluster biosynthesis |  |  |
 SufE-like protein 1 | 79 | Q84W65, At4g26500 |
TETRAPYRROLE SYNTHESIS | ||
 Delta-aminolevulinic acid dehydratase 1 | 54, 55 | Q9SFH9, At1g69740 |
SULFUR ASSIMILATION | ||
 ATP sulfurylase 1 | 56, 57 | Q9LIK9, At3g22890 |
PLASTID ORGANIZATION | ||
 3-isopropylmalate dehydratase small subunit 3 | 90, 102, 109 | Q9ZW85, At2g43090 |