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Fig. 6 | BMC Plant Biology

Fig. 6

From: An RTM-GWAS procedure reveals the QTL alleles and candidate genes for three yield-related traits in upland cotton

Fig. 6

Identification of the potential candidate genes associated with BW or LP. a Heatmap of expression patterns of the 93 putative candidate genes among 20 upland cotton (TM-1) tissues by the RNA-seq data from Nanjing Agricultural University (NAU). Red indicates high expression, and green indicates low expression. b Heatmap of expression patterns of the 100 putative candidate genes among 16 upland cotton (TM-1) tissues by the RNA-Seq data from Institute of Cotton Research of Chinese Academy of Agricultural Sciences (CRI), the16 genes were highlight in red in the a and b. c Venny diagram of the common genes between two RNA-seq data (NAU and CRI). d Gene structure of GH_D06G2161 and the position of the SNPLDB locus LDB_19_62926589 in the gene promoter region. E. Transcriptomic level of GH_D06G2161 in 20 different tissues based on the fragments per kilobase of transcript per million mapped reads (FPKM) values

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