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Fig. 5 | BMC Plant Biology

Fig. 5

From: Genome-wide association studies of ionomic and agronomic traits in USDA mini core collection of rice and comparative analyses of different mapping methods

Fig. 5

Genome-wide association analysis of Cd concentration with GLM, MLM, MLMM, and FarmCPU methods. a in flooded condition and, b unflooded condition. Quantile-quantile plot of each model. Black arrows indicated candidate genes. The horizontal dot grey line and green dots indicated the Bonferroni-corrected significance thresholds and SNPs at -log10(p) = 7.81. The horizontal solid grey line and red dots indicated the Bonferroni-corrected significance thresholds and SNPs at -log10(p) = 8.51. The vertical dash grey lines indicate the common QTL detected in flooded and unflooded condition

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