From: Long non-coding RNAs: emerging players regulating plant abiotic stress response and adaptation
Name | Characteristics | lncRNA and details | References | Link |
---|---|---|---|---|
PLncDB | It provides comprehensive data on Arabidopsis lncRNAs | Arabidopsis lncRNAs | [147] | |
PLNlncRbase | Detailed information on experimentally identified plant lncRNAs | Supply information on 1187 plant lncRNAs in | [146] | |
 |  | 43 plant species |  |  |
PNRD | It provides information on different types of ncRNAs | 150 plant species | [149] | |
CANTATAdb | Used for annotation of identified lncRNAs | Covers information on lnc RNA on 10 plant species | [16] | |
GREENC | Used for annotate lncRNAs | Annotation of more than 120,000 lncRNAs associated to 37 plant species could be done | [150] | |
PLncPRO | Used for prediction of lncRNAs in plants and used fornvestigating abiotic stress responsive lncRNAs in rice and chickpea | 3714 and 3457 lncRNAs in rice and chickpea for drought and salinity | [72] | |
PlaNC-TE | Provide insights about the relationship between ncRNA and TEs in plants | Information on overlapping of ncRNA and transposon elements from 40 plant genomes | [151] | |
EVLncRNAs | It contains lncRNA information on various species including plant | 1543 lncRNAs from 77 species and also 428 plant lncRNAs from 44 plant species | ||
CRISPRlnc | Database for validated CRISPR/Cas9 sgRNAs for lncRNAs from variousspecies including plants | 305 lncRNAs and 2102 validated sgRNAs on eight species including plant | [154] | |
CANTATAdb 2.0 | It provides information on annotation of plant lncRNAs | Covers information on lnc RNA on 39 plant species | [155] | |
PLIT | Used for investigating of plant lncRNAs from RNA seq data. | Provides information on lncRNA from 8 plant species | [156] | Â |
PLncDB | Detail information on plant lncRNAs | Provides plant lincRNAs and lncNATs information | [157] | – |